Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 AC018665.1-201ENST00000622927 1362 ntBASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 INE2-201ENST00000630399 1874 ntBASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 FO393414.2-201ENST00000405153 598 ntBASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 AL671277.1-201ENST00000429656 993 ntBASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 KRT18P2-201ENST00000447938 1258 ntBASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 RN7SL589P-201ENST00000481268 310 ntBASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 SLED1-202ENST00000512051 380 ntBASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
RCL1Q9Y2P8 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
RCL1Q9Y2P8 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
RCL1Q9Y2P8 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
RCL1Q9Y2P8 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.33□□□□□ -0.43
RCL1Q9Y2P8 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
RCL1Q9Y2P8 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RCL1Q9Y2P8 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.33□□□□□ -0.44
RCL1Q9Y2P8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RCL1Q9Y2P8 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
RCL1Q9Y2P8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RCL1Q9Y2P8 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RCL1Q9Y2P8 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.33□□□□□ -0.44
RCL1Q9Y2P8 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.33□□□□□ -0.44
RCL1Q9Y2P8 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.33□□□□□ -0.44
RCL1Q9Y2P8 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RCL1Q9Y2P8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RCL1Q9Y2P8 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms