Protein–RNA interactions for Protein: Q9Y2K6

USP20, Ubiquitin carboxyl-terminal hydrolase 20, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP20Q9Y2K6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 AL023775.1-201ENST00000454907 1746 ntBASIC16.45■□□□□ 0.22
USP20Q9Y2K6 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 AC018529.2-202ENST00000611482 3087 ntBASIC16.45■□□□□ 0.22
USP20Q9Y2K6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 ACTBP11-201ENST00000436287 1126 ntBASIC16.45■□□□□ 0.22
USP20Q9Y2K6 AL355994.2-201ENST00000447882 704 ntBASIC16.45■□□□□ 0.22
USP20Q9Y2K6 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 HOMER2P2-201ENST00000451621 847 ntBASIC16.45■□□□□ 0.22
USP20Q9Y2K6 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 FAM86HP-204ENST00000513466 959 ntBASIC16.45■□□□□ 0.22
USP20Q9Y2K6 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 RN7SL713P-201ENST00000582127 302 ntBASIC16.45■□□□□ 0.22
USP20Q9Y2K6 RN7SL219P-201ENST00000582872 296 ntBASIC16.45■□□□□ 0.22
USP20Q9Y2K6 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 TUBB1P2-201ENST00000422712 1306 ntBASIC16.45■□□□□ 0.22
USP20Q9Y2K6 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.45■□□□□ 0.22
USP20Q9Y2K6 TUBB1P1-201ENST00000503144 1300 ntBASIC16.45■□□□□ 0.22
USP20Q9Y2K6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 FTLP10-202ENST00000505798 471 ntBASIC16.44■□□□□ 0.22
USP20Q9Y2K6 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 AC007292.2-201ENST00000593524 1812 ntBASIC16.44■□□□□ 0.22
USP20Q9Y2K6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP20Q9Y2K6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
USP20Q9Y2K6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms