Protein–RNA interactions for Protein: Q9UM07

PADI4, Protein-arginine deiminase type-4, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PADI4Q9UM07 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
PADI4Q9UM07 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.12■□□□□ 0.01
PADI4Q9UM07 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.12■□□□□ 0.01
PADI4Q9UM07 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PADI4Q9UM07 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PADI4Q9UM07 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.12■□□□□ 0.01
PADI4Q9UM07 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PADI4Q9UM07 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PADI4Q9UM07 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PADI4Q9UM07 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
PADI4Q9UM07 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PADI4Q9UM07 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.12■□□□□ 0.01
PADI4Q9UM07 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PADI4Q9UM07 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PADI4Q9UM07 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
PADI4Q9UM07 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PADI4Q9UM07 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.12■□□□□ 0.01
PADI4Q9UM07 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PADI4Q9UM07 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PADI4Q9UM07 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PADI4Q9UM07 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PADI4Q9UM07 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PADI4Q9UM07 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.12■□□□□ 0.01
PADI4Q9UM07 AC015910.1-201ENST00000579400 975 ntBASIC15.12■□□□□ 0.01
PADI4Q9UM07 AC244669.2-201ENST00000612320 853 ntBASIC15.12■□□□□ 0.01
PADI4Q9UM07 OR2I1P-210ENST00000642037 4691 ntBASIC15.12■□□□□ 0.01
PADI4Q9UM07 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PADI4Q9UM07 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PADI4Q9UM07 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PADI4Q9UM07 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PADI4Q9UM07 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
PADI4Q9UM07 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PADI4Q9UM07 AGAP7P-201ENST00000582299 2062 ntBASIC15.12■□□□□ 0.01
PADI4Q9UM07 AGAP14-201ENST00000624701 2060 ntBASIC15.12■□□□□ 0.01
PADI4Q9UM07 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PADI4Q9UM07 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PADI4Q9UM07 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 YBX1P6-201ENST00000442962 1002 ntBASIC15.11■□□□□ 0.01
PADI4Q9UM07 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 RHOXF1P1-202ENST00000635473 501 ntBASIC15.11■□□□□ 0.01
PADI4Q9UM07 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
PADI4Q9UM07 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PADI4Q9UM07 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PADI4Q9UM07 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PADI4Q9UM07 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PADI4Q9UM07 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.1■□□□□ 0.01
PADI4Q9UM07 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.1■□□□□ 0.01
PADI4Q9UM07 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PADI4Q9UM07 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PADI4Q9UM07 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PADI4Q9UM07 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.1■□□□□ 0.01
PADI4Q9UM07 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PADI4Q9UM07 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms