Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.81■□□□□ 0.28
COL20A1Q9P218 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
COL20A1Q9P218 AL132994.2-201ENST00000603120 687 ntBASIC16.81■□□□□ 0.28
COL20A1Q9P218 AP000346.4-201ENST00000614827 381 ntBASIC16.81■□□□□ 0.28
COL20A1Q9P218 AL805961.1-203ENST00000641078 1258 ntBASIC16.81■□□□□ 0.28
COL20A1Q9P218 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.81■□□□□ 0.28
COL20A1Q9P218 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL20A1Q9P218 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL20A1Q9P218 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL20A1Q9P218 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.81■□□□□ 0.28
COL20A1Q9P218 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
COL20A1Q9P218 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL20A1Q9P218 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.81■□□□□ 0.28
COL20A1Q9P218 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COL20A1Q9P218 AL590440.2-201ENST00000641973 1595 ntBASIC16.81■□□□□ 0.28
COL20A1Q9P218 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.81■□□□□ 0.28
COL20A1Q9P218 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL20A1Q9P218 TMBIM7P-202ENST00000641474 1516 ntBASIC16.8■□□□□ 0.28
COL20A1Q9P218 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL20A1Q9P218 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL20A1Q9P218 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL20A1Q9P218 AL136172.1-201ENST00000598590 1394 ntBASIC16.8■□□□□ 0.28
COL20A1Q9P218 MRPL37P1-201ENST00000592451 1337 ntBASIC16.8■□□□□ 0.28
COL20A1Q9P218 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 MIR769-201ENST00000390225 118 ntBASIC16.8■□□□□ 0.28
COL20A1Q9P218 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 AC011742.3-201ENST00000439053 820 ntBASIC16.8■□□□□ 0.28
COL20A1Q9P218 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 IMP3P2-201ENST00000489760 475 ntBASIC16.8■□□□□ 0.28
COL20A1Q9P218 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 AC024681.1-201ENST00000521917 487 ntBASIC16.8■□□□□ 0.28
COL20A1Q9P218 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 AC091544.8-201ENST00000619490 361 ntBASIC16.8■□□□□ 0.28
COL20A1Q9P218 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL20A1Q9P218 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
COL20A1Q9P218 AC018529.2-202ENST00000611482 3087 ntBASIC16.8■□□□□ 0.28
COL20A1Q9P218 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL20A1Q9P218 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL20A1Q9P218 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
COL20A1Q9P218 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL20A1Q9P218 AC104640.1-201ENST00000562617 2109 ntBASIC16.79■□□□□ 0.28
COL20A1Q9P218 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL20A1Q9P218 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL20A1Q9P218 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.79■□□□□ 0.28
COL20A1Q9P218 AC018442.1-201ENST00000421439 2061 ntBASIC16.79■□□□□ 0.28
COL20A1Q9P218 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.79■□□□□ 0.28
COL20A1Q9P218 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL20A1Q9P218 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL20A1Q9P218 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL20A1Q9P218 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL20A1Q9P218 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL20A1Q9P218 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
COL20A1Q9P218 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL20A1Q9P218 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.79■□□□□ 0.28
COL20A1Q9P218 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.79■□□□□ 0.28
COL20A1Q9P218 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.79■□□□□ 0.28
COL20A1Q9P218 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.79■□□□□ 0.28
COL20A1Q9P218 AC006122.1-201ENST00000493323 440 ntBASIC16.79■□□□□ 0.28
COL20A1Q9P218 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.79■□□□□ 0.28
COL20A1Q9P218 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.79■□□□□ 0.28
COL20A1Q9P218 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.79■□□□□ 0.28
COL20A1Q9P218 AC091812.3-201ENST00000621362 345 ntBASIC16.79■□□□□ 0.28
COL20A1Q9P218 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.79■□□□□ 0.28
COL20A1Q9P218 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
COL20A1Q9P218 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL20A1Q9P218 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL20A1Q9P218 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.79■□□□□ 0.28
COL20A1Q9P218 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL20A1Q9P218 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL20A1Q9P218 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL20A1Q9P218 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL20A1Q9P218 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.79■□□□□ 0.28
COL20A1Q9P218 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL20A1Q9P218 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.79■□□□□ 0.28
COL20A1Q9P218 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL20A1Q9P218 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL20A1Q9P218 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL20A1Q9P218 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 AC144522.1-201ENST00000625111 1658 ntBASIC16.78■□□□□ 0.28
COL20A1Q9P218 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL20A1Q9P218 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL20A1Q9P218 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL20A1Q9P218 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL20A1Q9P218 AC006504.5-208ENST00000588784 2401 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 246.2 ms