Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 IGHV3-71-201ENST00000523324 359 ntBASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 AC015910.1-201ENST00000579400 975 ntBASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 CU639417.3-201ENST00000624240 1404 ntBASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCM2LQ9NUG4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 DGCR9-201ENST00000609630 2415 ntBASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 AL354702.1-201ENST00000442006 1960 ntBASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 AC016397.2-201ENST00000624848 1985 ntBASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 LILRP1-201ENST00000444199 1370 ntBASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 AC100757.3-201ENST00000622361 1406 ntBASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 FO393414.2-201ENST00000405153 598 ntBASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 GPR53P-205ENST00000457298 1084 ntBASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 AP000842.3-202ENST00000569238 1080 ntBASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 MIR6799-201ENST00000620297 69 ntBASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 AL590560.3-201ENST00000623350 461 ntBASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 AC073592.8-201ENST00000624126 511 ntBASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms