Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 AL589702.1-201ENST00000641229 1509 ntBASIC12.22□□□□□ -0.45
NKX6-2Q9C056 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 AP000845.1-201ENST00000581677 2131 ntBASIC12.22□□□□□ -0.45
NKX6-2Q9C056 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.22□□□□□ -0.45
NKX6-2Q9C056 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 PPOX-219ENST00000544598 813 ntTSL 2 BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX6-2Q9C056 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 AC138969.3-201ENST00000546612 1459 ntBASIC12.21□□□□□ -0.45
NKX6-2Q9C056 AC138932.2-201ENST00000548268 1459 ntBASIC12.21□□□□□ -0.45
NKX6-2Q9C056 AC126755.4-201ENST00000549796 1459 ntBASIC12.21□□□□□ -0.45
NKX6-2Q9C056 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 AC136632.2-201ENST00000512891 861 ntBASIC12.21□□□□□ -0.45
NKX6-2Q9C056 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 MIR3180-1-201ENST00000580374 94 ntBASIC12.21□□□□□ -0.45
NKX6-2Q9C056 MIR3180-3-201ENST00000584616 94 ntBASIC12.21□□□□□ -0.45
NKX6-2Q9C056 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX6-2Q9C056 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NKX6-2Q9C056 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
NKX6-2Q9C056 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
NKX6-2Q9C056 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
NKX6-2Q9C056 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms