Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 AC008687.7-202ENST00000637404 953 ntBASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 AC055811.4-201ENST00000624039 1754 ntBASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 REXO1L5P-201ENST00000622260 2098 ntBASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 ST20-AS1-201ENST00000560255 4223 ntBASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 AHCYP2-201ENST00000430630 1300 ntBASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 AC006001.1-201ENST00000325130 474 ntBASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 CD8B2-202ENST00000417670 633 ntBASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 AC245100.3-201ENST00000441281 285 ntBASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 AC006453.4-201ENST00000636949 1252 ntBASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 AL360270.3-201ENST00000609118 1348 ntBASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SSBP3Q9BWW4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.39
SSBP3Q9BWW4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SSBP3Q9BWW4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.58□□□□□ -0.39
SSBP3Q9BWW4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.58□□□□□ -0.39
SSBP3Q9BWW4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
SSBP3Q9BWW4 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SSBP3Q9BWW4 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 AC126365.1-201ENST00000578585 1514 ntBASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms