Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 BTNL10-201ENST00000595971 695 ntBASIC13.63□□□□□ -0.23
USB1Q9BQ65 AC010319.3-201ENST00000597028 470 ntBASIC13.63□□□□□ -0.23
USB1Q9BQ65 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC13.63□□□□□ -0.23
USB1Q9BQ65 AC017083.2-201ENST00000608069 979 ntBASIC13.63□□□□□ -0.23
USB1Q9BQ65 AL022328.1-201ENST00000610050 478 ntBASIC13.63□□□□□ -0.23
USB1Q9BQ65 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.63□□□□□ -0.23
USB1Q9BQ65 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
USB1Q9BQ65 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
USB1Q9BQ65 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
USB1Q9BQ65 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
USB1Q9BQ65 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
USB1Q9BQ65 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.63□□□□□ -0.23
USB1Q9BQ65 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
USB1Q9BQ65 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.63□□□□□ -0.23
USB1Q9BQ65 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
USB1Q9BQ65 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
USB1Q9BQ65 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
USB1Q9BQ65 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
USB1Q9BQ65 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.63□□□□□ -0.23
USB1Q9BQ65 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
USB1Q9BQ65 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
USB1Q9BQ65 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.63□□□□□ -0.23
USB1Q9BQ65 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
USB1Q9BQ65 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
USB1Q9BQ65 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 U91328.1-201ENST00000437528 223 ntBASIC13.62□□□□□ -0.23
USB1Q9BQ65 ATP5G2P4-201ENST00000442175 420 ntBASIC13.62□□□□□ -0.23
USB1Q9BQ65 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 KRT17P8-201ENST00000540749 863 ntBASIC13.62□□□□□ -0.23
USB1Q9BQ65 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 AL359711.2-201ENST00000563105 872 ntBASIC13.62□□□□□ -0.23
USB1Q9BQ65 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 AC124283.3-201ENST00000570869 594 ntBASIC13.62□□□□□ -0.23
USB1Q9BQ65 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 AC233724.13-201ENST00000598383 410 ntBASIC13.62□□□□□ -0.23
USB1Q9BQ65 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 MIR6805-201ENST00000615055 62 ntBASIC13.62□□□□□ -0.23
USB1Q9BQ65 AL645728.2-202ENST00000641679 227 ntBASIC13.62□□□□□ -0.23
USB1Q9BQ65 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
USB1Q9BQ65 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.62□□□□□ -0.23
USB1Q9BQ65 CICP23-201ENST00000605013 2741 ntBASIC13.62□□□□□ -0.23
USB1Q9BQ65 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms