Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 CICP8-201ENST00000455800 2813 ntBASIC13.55□□□□□ -0.24
PTP4A1Q93096 AGGF1P1-201ENST00000509500 2073 ntBASIC13.55□□□□□ -0.24
PTP4A1Q93096 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 DRD5P1-201ENST00000456605 1438 ntBASIC13.55□□□□□ -0.24
PTP4A1Q93096 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.54□□□□□ -0.24
PTP4A1Q93096 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
PTP4A1Q93096 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 AL645937.2-201ENST00000396808 931 ntBASIC13.53□□□□□ -0.24
PTP4A1Q93096 AL353779.1-201ENST00000434793 351 ntBASIC13.53□□□□□ -0.24
PTP4A1Q93096 INGX-202ENST00000489074 768 ntBASIC13.53□□□□□ -0.24
PTP4A1Q93096 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 AC009407.1-201ENST00000568958 598 ntBASIC13.53□□□□□ -0.24
PTP4A1Q93096 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms