Protein–RNA interactions for Protein: Q8N9Q2

SREK1IP1, Protein SREK1IP1, humanhuman

Predicted RBP Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1Q8N9Q2 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 RASA4DP-201ENST00000460726 1199 ntBASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 AC109462.3-201ENST00000573934 613 ntBASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 AD001527.2-201ENST00000622994 785 ntBASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 AP000437.1-201ENST00000624057 2085 ntBASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 ACE3P-201ENST00000423435 1973 ntBASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SREK1IP1Q8N9Q2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 AC093525.7-201ENST00000569852 3626 ntBASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 DUX4L17-201ENST00000557360 1267 ntBASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 GCSHP2-201ENST00000560971 527 ntBASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 AC145285.6-201ENST00000604632 637 ntBASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SREK1IP1Q8N9Q2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SREK1IP1Q8N9Q2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SREK1IP1Q8N9Q2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SREK1IP1Q8N9Q2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.46□□□□□ -0.42
SREK1IP1Q8N9Q2 KRT8P24-201ENST00000560290 1559 ntBASIC12.46□□□□□ -0.42
SREK1IP1Q8N9Q2 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
SREK1IP1Q8N9Q2 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SREK1IP1Q8N9Q2 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SREK1IP1Q8N9Q2 PAPLN-208ENST00000555445 4282 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
SREK1IP1Q8N9Q2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
SREK1IP1Q8N9Q2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SREK1IP1Q8N9Q2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
SREK1IP1Q8N9Q2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SREK1IP1Q8N9Q2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms