Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF2Q8N5M1 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
ATPAF2Q8N5M1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF2Q8N5M1 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF2Q8N5M1 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.43■□□□□ 0.06
ATPAF2Q8N5M1 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
ATPAF2Q8N5M1 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 INTS4P1-203ENST00000641008 3683 ntBASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 BCRP2-202ENST00000447763 634 ntBASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 BCRP6-201ENST00000510112 632 ntBASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 BCRP7-201ENST00000511549 544 ntBASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 AL022328.1-201ENST00000610050 478 ntBASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATPAF2Q8N5M1 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 AL138709.1-201ENST00000614840 1693 ntBASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 AL390755.1-201ENST00000623716 2027 ntBASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 MTHFR-210ENST00000641407 2387 ntBASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 C2orf27AP3-201ENST00000434123 579 ntBASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 AC245100.3-201ENST00000441281 285 ntBASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 FO681548.1-201ENST00000455617 1132 ntBASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 RN7SL48P-201ENST00000579283 293 ntBASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 AL354718.3-201ENST00000616414 581 ntBASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 ENPP7P14-201ENST00000621765 1040 ntBASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 CR382287.1-201ENST00000623954 586 ntBASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.41■□□□□ 0.06
ATPAF2Q8N5M1 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms