Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 TARDBPP1-201ENST00000442013 1203 ntBASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 AC055811.4-201ENST00000624039 1754 ntBASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CRLF3Q8IUI8 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 AL137784.3-201ENST00000623858 2288 ntBASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 UGT1A2P-201ENST00000454886 866 ntBASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 TPT1P11-201ENST00000458482 498 ntBASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 AL138828.2-201ENST00000615812 383 ntBASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 AL035456.1-201ENST00000456064 1369 ntBASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 AC100757.3-201ENST00000622361 1406 ntBASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CRLF3Q8IUI8 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
CRLF3Q8IUI8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CRLF3Q8IUI8 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.08■□□□□ 0.01
CRLF3Q8IUI8 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.08■□□□□ 0.01
CRLF3Q8IUI8 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CRLF3Q8IUI8 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CRLF3Q8IUI8 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CRLF3Q8IUI8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.08■□□□□ 0
CRLF3Q8IUI8 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CRLF3Q8IUI8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.08■□□□□ 0
CRLF3Q8IUI8 AC005252.3-201ENST00000623855 2258 ntBASIC15.08■□□□□ 0
CRLF3Q8IUI8 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CRLF3Q8IUI8 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CRLF3Q8IUI8 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.08■□□□□ 0
CRLF3Q8IUI8 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.08■□□□□ 0
CRLF3Q8IUI8 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CRLF3Q8IUI8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CRLF3Q8IUI8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CRLF3Q8IUI8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.08■□□□□ 0
CRLF3Q8IUI8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms