Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 GAPDHP40-201ENST00000505218 1006 ntBASIC15.97■□□□□ 0.15
RNF135Q8IUD6 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 AC005730.2-201ENST00000564549 1184 ntBASIC15.97■□□□□ 0.15
RNF135Q8IUD6 AF254983.2-201ENST00000612331 135 ntBASIC15.97■□□□□ 0.15
RNF135Q8IUD6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 AC104640.1-201ENST00000562617 2109 ntBASIC15.97■□□□□ 0.15
RNF135Q8IUD6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF135Q8IUD6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 KLF2P2-201ENST00000416807 1039 ntBASIC15.96■□□□□ 0.15
RNF135Q8IUD6 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 RPL13AP19-201ENST00000434320 584 ntBASIC15.96■□□□□ 0.15
RNF135Q8IUD6 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 AL161670.2-201ENST00000557650 1227 ntBASIC15.96■□□□□ 0.15
RNF135Q8IUD6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF135Q8IUD6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.96■□□□□ 0.14
RNF135Q8IUD6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF135Q8IUD6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RNF135Q8IUD6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RNF135Q8IUD6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF135Q8IUD6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
RNF135Q8IUD6 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.96■□□□□ 0.14
RNF135Q8IUD6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
RNF135Q8IUD6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 AC136621.1-201ENST00000624017 2304 ntBASIC15.95■□□□□ 0.14
RNF135Q8IUD6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 AL513477.1-201ENST00000602865 2407 ntBASIC15.95■□□□□ 0.14
RNF135Q8IUD6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 PPY2P-201ENST00000582808 702 ntBASIC15.95■□□□□ 0.14
RNF135Q8IUD6 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF135Q8IUD6 COX6A1P2-201ENST00000620597 330 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms