Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AL139094.1-201ENST00000405549 1188 ntBASIC15.68■□□□□ 0.1
RFX6Q8HWS3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.68■□□□□ 0.1
RFX6Q8HWS3 SOCS2P1-201ENST00000417727 557 ntBASIC15.68■□□□□ 0.1
RFX6Q8HWS3 AC098850.1-201ENST00000419919 790 ntBASIC15.68■□□□□ 0.1
RFX6Q8HWS3 AL442647.2-201ENST00000429864 857 ntBASIC15.68■□□□□ 0.1
RFX6Q8HWS3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.68■□□□□ 0.1
RFX6Q8HWS3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.68■□□□□ 0.1
RFX6Q8HWS3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.68■□□□□ 0.1
RFX6Q8HWS3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.68■□□□□ 0.1
RFX6Q8HWS3 AC092552.1-201ENST00000547243 906 ntBASIC15.68■□□□□ 0.1
RFX6Q8HWS3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.68■□□□□ 0.1
RFX6Q8HWS3 AC124283.3-201ENST00000570869 594 ntBASIC15.68■□□□□ 0.1
RFX6Q8HWS3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.68■□□□□ 0.1
RFX6Q8HWS3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.68■□□□□ 0.1
RFX6Q8HWS3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
RFX6Q8HWS3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RFX6Q8HWS3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFX6Q8HWS3 AJ011932.1-201ENST00000621707 465 ntBASIC15.68■□□□□ 0.1
RFX6Q8HWS3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFX6Q8HWS3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFX6Q8HWS3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFX6Q8HWS3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFX6Q8HWS3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RFX6Q8HWS3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFX6Q8HWS3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFX6Q8HWS3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFX6Q8HWS3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 BX640514.1-201ENST00000583223 1918 ntBASIC15.67■□□□□ 0.1
RFX6Q8HWS3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 CHCHD2P3-201ENST00000603038 451 ntBASIC15.67■□□□□ 0.1
RFX6Q8HWS3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 PRSS30P-206ENST00000641773 873 ntBASIC15.67■□□□□ 0.1
RFX6Q8HWS3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 AC117489.1-201ENST00000625169 3217 ntBASIC15.67■□□□□ 0.1
RFX6Q8HWS3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.67■□□□□ 0.1
RFX6Q8HWS3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms