Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 RN7SKP230-201ENST00000365642 335 ntBASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 EEF1DP1-201ENST00000585891 896 ntBASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 INE2-201ENST00000630399 1874 ntBASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM4Q86VH4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 Z93015.1-201ENST00000451718 390 ntBASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 RPL13AP20-201ENST00000459725 609 ntBASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms