Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF546Q86UE3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF546Q86UE3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 RNPS1P1-201ENST00000507437 918 ntBASIC12.55□□□□□ -0.4
ZNF546Q86UE3 PRYP6-201ENST00000514804 343 ntBASIC12.55□□□□□ -0.4
ZNF546Q86UE3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 CLEC4GP1-201ENST00000596555 870 ntBASIC12.55□□□□□ -0.4
ZNF546Q86UE3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF546Q86UE3 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 REXO1L4P-201ENST00000605109 1937 ntBASIC12.54□□□□□ -0.4
ZNF546Q86UE3 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 AP002414.3-201ENST00000589352 1468 ntBASIC12.54□□□□□ -0.4
ZNF546Q86UE3 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 AL365181.3-201ENST00000605886 3222 ntBASIC12.54□□□□□ -0.4
ZNF546Q86UE3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms