Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 TCAF2P1-201ENST00000291129 2421 ntBASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 IGHJ2P-201ENST00000454480 60 ntBASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 TUBB8P8-201ENST00000458717 1058 ntBASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 AC005324.6-201ENST00000587972 613 ntBASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 AC008825.2-201ENST00000603374 718 ntBASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 AC004923.1-202ENST00000642106 209 ntBASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE3BQ7Z3V4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 AC013355.1-201ENST00000562625 723 ntBASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 NDUFV2P1-201ENST00000596415 907 ntBASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 AL021578.1-201ENST00000613646 709 ntBASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
UBE3BQ7Z3V4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
UBE3BQ7Z3V4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
UBE3BQ7Z3V4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBE3BQ7Z3V4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBE3BQ7Z3V4 AC144831.1-201ENST00000573312 2656 ntBASIC18.58■□□□□ 0.57
UBE3BQ7Z3V4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
UBE3BQ7Z3V4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBE3BQ7Z3V4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
UBE3BQ7Z3V4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBE3BQ7Z3V4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.58■□□□□ 0.57
UBE3BQ7Z3V4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
UBE3BQ7Z3V4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBE3BQ7Z3V4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.58■□□□□ 0.57
UBE3BQ7Z3V4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBE3BQ7Z3V4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
UBE3BQ7Z3V4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBE3BQ7Z3V4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms