Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 AC105137.3-201ENST00000617588 984 ntBASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 AC087481.3-201ENST00000602886 1894 ntBASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNKSR3Q6P9H4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 REXO1L2P-201ENST00000425429 2069 ntBASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 RN7SL530P-201ENST00000485097 298 ntBASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 AL022334.2-201ENST00000610000 484 ntBASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 MROH4P-201ENST00000431302 1578 ntBASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNKSR3Q6P9H4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 WASH3P-207ENST00000560956 1394 ntBASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 AC020658.6-201ENST00000623564 1870 ntBASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 AC009093.10-201ENST00000641956 1442 ntBASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 AC092638.2-201ENST00000441105 947 ntBASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 AC127024.7-201ENST00000625101 200 ntBASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 MRPL37P1-201ENST00000592451 1337 ntBASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CNKSR3Q6P9H4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms