Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF20Q5VTR2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF20Q5VTR2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF20Q5VTR2 AC092364.2-202ENST00000597012 1073 ntBASIC17.97■□□□□ 0.47
RNF20Q5VTR2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF20Q5VTR2 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RNF20Q5VTR2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RNF20Q5VTR2 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF20Q5VTR2 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RNF20Q5VTR2 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
RNF20Q5VTR2 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF20Q5VTR2 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF20Q5VTR2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF20Q5VTR2 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF20Q5VTR2 AC005912.2-201ENST00000619492 2400 ntBASIC17.97■□□□□ 0.47
RNF20Q5VTR2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF20Q5VTR2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF20Q5VTR2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RNF20Q5VTR2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.96■□□□□ 0.46
RNF20Q5VTR2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.96■□□□□ 0.46
RNF20Q5VTR2 AC023908.3-201ENST00000564211 3047 ntBASIC17.96■□□□□ 0.46
RNF20Q5VTR2 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 AC007191.1-201ENST00000623179 2995 ntBASIC17.95■□□□□ 0.46
RNF20Q5VTR2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 AP006294.1-201ENST00000415407 339 ntBASIC17.95■□□□□ 0.46
RNF20Q5VTR2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 TLE1P1-201ENST00000422965 589 ntBASIC17.95■□□□□ 0.46
RNF20Q5VTR2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 AC027307.3-201ENST00000594262 1100 ntBASIC17.95■□□□□ 0.46
RNF20Q5VTR2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RNF20Q5VTR2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms