Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 AC007551.1-201ENST00000457394 519 ntBASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 FTH1P14-201ENST00000482930 551 ntBASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 RN7SL48P-201ENST00000579283 293 ntBASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 AC132938.4-201ENST00000623835 848 ntBASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC39BQ5VTQ0 PDIA3P1-201ENST00000471856 1510 ntBASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 GRK6P1-201ENST00000400595 1711 ntBASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 CICP14-201ENST00000629111 2732 ntBASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 AL138709.1-201ENST00000614840 1693 ntBASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 MIR1909-201ENST00000411312 80 ntBASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 RPL7P3-201ENST00000441388 714 ntBASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 KLF2P4-201ENST00000451959 1225 ntBASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 CROCCP4-201ENST00000457096 498 ntBASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 AC104989.1-201ENST00000519711 778 ntBASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 AP000812.2-201ENST00000538934 718 ntBASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 AC079316.1-201ENST00000548397 411 ntBASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 KRT90P-201ENST00000549264 1064 ntBASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 AL359258.3-201ENST00000622910 2331 ntBASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TTC39BQ5VTQ0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 ACE3P-201ENST00000423435 1973 ntBASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms