Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC108734.2-201ENST00000420887 1069 ntBASIC12.76□□□□□ -0.37
LRRK2Q5S007 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 MIR2278-201ENST00000516344 96 ntBASIC12.76□□□□□ -0.37
LRRK2Q5S007 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRRK2Q5S007 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.76□□□□□ -0.37
LRRK2Q5S007 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRK2Q5S007 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRK2Q5S007 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 TNRC18P3-201ENST00000441896 2691 ntBASIC12.75□□□□□ -0.37
LRRK2Q5S007 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 CASP2-203ENST00000392925 616 ntTSL 3 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 OLA1P2-201ENST00000395519 1264 ntBASIC12.75□□□□□ -0.37
LRRK2Q5S007 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 AC104961.1-201ENST00000427605 771 ntBASIC12.75□□□□□ -0.37
LRRK2Q5S007 KRT18P46-201ENST00000435568 1279 ntBASIC12.75□□□□□ -0.37
LRRK2Q5S007 AP003040.1-201ENST00000532044 1024 ntBASIC12.75□□□□□ -0.37
LRRK2Q5S007 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 COX5A-205ENST00000568517 582 ntTSL 3 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC12.75□□□□□ -0.37
LRRK2Q5S007 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 CICP13-201ENST00000422015 2789 ntBASIC12.75□□□□□ -0.37
LRRK2Q5S007 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.75□□□□□ -0.37
LRRK2Q5S007 MIR645-201ENST00000385283 94 ntBASIC12.75□□□□□ -0.37
LRRK2Q5S007 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LRRK2Q5S007 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC12.75□□□□□ -0.37
LRRK2Q5S007 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.74□□□□□ -0.37
LRRK2Q5S007 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.74□□□□□ -0.37
LRRK2Q5S007 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
LRRK2Q5S007 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC12.74□□□□□ -0.37
LRRK2Q5S007 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC12.74□□□□□ -0.37
LRRK2Q5S007 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC12.74□□□□□ -0.37
LRRK2Q5S007 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.74□□□□□ -0.37
LRRK2Q5S007 KRT18P4-201ENST00000422599 1288 ntBASIC12.74□□□□□ -0.37
LRRK2Q5S007 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.74□□□□□ -0.37
LRRK2Q5S007 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC12.74□□□□□ -0.37
LRRK2Q5S007 MIR4254-201ENST00000581063 76 ntBASIC12.74□□□□□ -0.37
LRRK2Q5S007 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.74□□□□□ -0.37
LRRK2Q5S007 AC005865.2-202ENST00000635814 725 ntBASIC12.74□□□□□ -0.37
LRRK2Q5S007 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
LRRK2Q5S007 AL513523.2-202ENST00000427283 2040 ntBASIC12.74□□□□□ -0.37
LRRK2Q5S007 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC12.74□□□□□ -0.37
LRRK2Q5S007 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
LRRK2Q5S007 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms