Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 TLE1P1-201ENST00000422965 589 ntBASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 AL355864.2-201ENST00000447420 863 ntBASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 AC138696.2-201ENST00000607376 223 ntBASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 AC138466.3-201ENST00000619983 221 ntBASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.19■□□□□ 0.18
CBWD3Q5JTY5 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 AL590640.2-201ENST00000457038 527 ntBASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 AL391280.1-201ENST00000506969 1062 ntBASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 AC131206.1-201ENST00000538078 1211 ntBASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 AC233724.13-201ENST00000598383 410 ntBASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 ECM1P1-201ENST00000604092 1279 ntBASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 AC117489.1-201ENST00000625169 3217 ntBASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBWD3Q5JTY5 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBWD3Q5JTY5 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CBWD3Q5JTY5 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CBWD3Q5JTY5 AGGF1P1-201ENST00000509500 2073 ntBASIC16.17■□□□□ 0.18
CBWD3Q5JTY5 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CBWD3Q5JTY5 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.17■□□□□ 0.18
CBWD3Q5JTY5 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBWD3Q5JTY5 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBWD3Q5JTY5 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBWD3Q5JTY5 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBWD3Q5JTY5 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CBWD3Q5JTY5 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms