Protein–RNA interactions for Protein: Q3SY56

SP6, Transcription factor Sp6, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP6Q3SY56 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.53□□□□□ -0.4
SP6Q3SY56 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.53□□□□□ -0.4
SP6Q3SY56 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SP6Q3SY56 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SP6Q3SY56 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SP6Q3SY56 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SP6Q3SY56 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SP6Q3SY56 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SP6Q3SY56 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SP6Q3SY56 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SP6Q3SY56 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SP6Q3SY56 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SP6Q3SY56 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SP6Q3SY56 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.53□□□□□ -0.4
SP6Q3SY56 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SP6Q3SY56 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SP6Q3SY56 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SP6Q3SY56 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SP6Q3SY56 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SP6Q3SY56 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SP6Q3SY56 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SP6Q3SY56 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SP6Q3SY56 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.53□□□□□ -0.4
SP6Q3SY56 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SP6Q3SY56 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SP6Q3SY56 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.53□□□□□ -0.4
SP6Q3SY56 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SP6Q3SY56 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SP6Q3SY56 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SP6Q3SY56 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
SP6Q3SY56 AL157414.3-201ENST00000624276 1954 ntBASIC12.52□□□□□ -0.4
SP6Q3SY56 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SP6Q3SY56 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SP6Q3SY56 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.52□□□□□ -0.4
SP6Q3SY56 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
SP6Q3SY56 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SP6Q3SY56 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.52□□□□□ -0.4
SP6Q3SY56 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.52□□□□□ -0.4
SP6Q3SY56 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SP6Q3SY56 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SP6Q3SY56 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SP6Q3SY56 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.52□□□□□ -0.4
SP6Q3SY56 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.52□□□□□ -0.4
SP6Q3SY56 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.52□□□□□ -0.4
SP6Q3SY56 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
SP6Q3SY56 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SP6Q3SY56 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.52□□□□□ -0.41
SP6Q3SY56 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SP6Q3SY56 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 AL590627.1-203ENST00000421194 1026 ntBASIC12.52□□□□□ -0.41
SP6Q3SY56 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.52□□□□□ -0.41
SP6Q3SY56 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.52□□□□□ -0.41
SP6Q3SY56 AC005237.2-201ENST00000434368 219 ntBASIC12.52□□□□□ -0.41
SP6Q3SY56 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.52□□□□□ -0.41
SP6Q3SY56 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.52□□□□□ -0.41
SP6Q3SY56 SLC25A1P1-201ENST00000528351 927 ntBASIC12.52□□□□□ -0.41
SP6Q3SY56 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.52□□□□□ -0.41
SP6Q3SY56 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.52□□□□□ -0.41
SP6Q3SY56 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.52□□□□□ -0.41
SP6Q3SY56 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.52□□□□□ -0.41
SP6Q3SY56 FAM197Y3-203ENST00000618346 717 ntBASIC12.52□□□□□ -0.41
SP6Q3SY56 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.52□□□□□ -0.41
SP6Q3SY56 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 AC130686.1-201ENST00000622936 2466 ntBASIC12.52□□□□□ -0.41
SP6Q3SY56 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.52□□□□□ -0.41
SP6Q3SY56 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.52□□□□□ -0.41
SP6Q3SY56 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.52□□□□□ -0.41
SP6Q3SY56 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.52□□□□□ -0.41
SP6Q3SY56 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SP6Q3SY56 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SP6Q3SY56 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SP6Q3SY56 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SP6Q3SY56 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SP6Q3SY56 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SP6Q3SY56 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.51□□□□□ -0.41
SP6Q3SY56 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms