Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CDK3Q00526 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDK3Q00526 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDK3Q00526 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.72□□□□□ -0.05
CDK3Q00526 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDK3Q00526 AC010141.1-201ENST00000411585 623 ntBASIC14.72□□□□□ -0.05
CDK3Q00526 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDK3Q00526 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.72□□□□□ -0.05
CDK3Q00526 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.72□□□□□ -0.05
CDK3Q00526 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CDK3Q00526 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.72□□□□□ -0.05
CDK3Q00526 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.72□□□□□ -0.05
CDK3Q00526 ALG3P1-201ENST00000508806 1114 ntBASIC14.72□□□□□ -0.05
CDK3Q00526 GCOM2-201ENST00000509133 1104 ntBASIC14.72□□□□□ -0.05
CDK3Q00526 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.72□□□□□ -0.05
CDK3Q00526 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDK3Q00526 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDK3Q00526 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.72□□□□□ -0.05
CDK3Q00526 GPR182-203ENST00000622922 591 ntBASIC14.72□□□□□ -0.05
CDK3Q00526 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CDK3Q00526 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDK3Q00526 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CDK3Q00526 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.72□□□□□ -0.05
CDK3Q00526 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.72□□□□□ -0.05
CDK3Q00526 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.72□□□□□ -0.05
CDK3Q00526 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDK3Q00526 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CDK3Q00526 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDK3Q00526 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.72□□□□□ -0.05
CDK3Q00526 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDK3Q00526 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.71□□□□□ -0.05
CDK3Q00526 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CDK3Q00526 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.71□□□□□ -0.05
CDK3Q00526 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CDK3Q00526 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 CICP23-201ENST00000605013 2741 ntBASIC14.71□□□□□ -0.05
CDK3Q00526 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDK3Q00526 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.71□□□□□ -0.05
CDK3Q00526 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.71□□□□□ -0.05
CDK3Q00526 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.71□□□□□ -0.05
CDK3Q00526 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.71□□□□□ -0.05
CDK3Q00526 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.71□□□□□ -0.05
CDK3Q00526 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.71□□□□□ -0.05
CDK3Q00526 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 AC099548.2-209ENST00000480264 625 ntBASIC14.71□□□□□ -0.05
CDK3Q00526 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.71□□□□□ -0.05
CDK3Q00526 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.71□□□□□ -0.05
CDK3Q00526 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.71□□□□□ -0.05
CDK3Q00526 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.71□□□□□ -0.05
CDK3Q00526 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.71□□□□□ -0.05
CDK3Q00526 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.71□□□□□ -0.05
CDK3Q00526 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.71□□□□□ -0.05
CDK3Q00526 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDK3Q00526 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.71□□□□□ -0.05
CDK3Q00526 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.71□□□□□ -0.05
CDK3Q00526 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDK3Q00526 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CDK3Q00526 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDK3Q00526 AC018735.1-201ENST00000437208 1502 ntBASIC14.71□□□□□ -0.06
CDK3Q00526 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDK3Q00526 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDK3Q00526 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.71□□□□□ -0.06
CDK3Q00526 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CDK3Q00526 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 AC007326.2-201ENST00000624224 7579 ntBASIC14.7□□□□□ -0.06
CDK3Q00526 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 AJ011931.1-201ENST00000618749 2492 ntBASIC14.7□□□□□ -0.06
CDK3Q00526 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.7□□□□□ -0.06
CDK3Q00526 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CDK3Q00526 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.7□□□□□ -0.06
CDK3Q00526 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDK3Q00526 MIR1247-201ENST00000408206 136 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms