Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
IRX4P78413 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
IRX4P78413 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.74■□□□□ 0.11
IRX4P78413 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
IRX4P78413 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.74■□□□□ 0.11
IRX4P78413 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.74■□□□□ 0.11
IRX4P78413 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
IRX4P78413 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.74■□□□□ 0.11
IRX4P78413 PTP4A1P2-201ENST00000546033 454 ntBASIC15.74■□□□□ 0.11
IRX4P78413 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.74■□□□□ 0.11
IRX4P78413 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.74■□□□□ 0.11
IRX4P78413 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.74■□□□□ 0.11
IRX4P78413 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
IRX4P78413 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.74■□□□□ 0.11
IRX4P78413 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.74■□□□□ 0.11
IRX4P78413 AC023024.2-201ENST00000623561 1993 ntBASIC15.74■□□□□ 0.11
IRX4P78413 AC117489.1-201ENST00000625169 3217 ntBASIC15.74■□□□□ 0.11
IRX4P78413 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.74■□□□□ 0.11
IRX4P78413 AC148477.4-201ENST00000613430 1793 ntBASIC15.74■□□□□ 0.11
IRX4P78413 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
IRX4P78413 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.74■□□□□ 0.11
IRX4P78413 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
IRX4P78413 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
IRX4P78413 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.74■□□□□ 0.11
IRX4P78413 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.74■□□□□ 0.11
IRX4P78413 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.74■□□□□ 0.11
IRX4P78413 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
IRX4P78413 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
IRX4P78413 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
IRX4P78413 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IRX4P78413 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IRX4P78413 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
IRX4P78413 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.73■□□□□ 0.11
IRX4P78413 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IRX4P78413 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
IRX4P78413 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
IRX4P78413 LINC00552-201ENST00000625151 2579 ntBASIC15.73■□□□□ 0.11
IRX4P78413 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
IRX4P78413 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.73■□□□□ 0.11
IRX4P78413 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
IRX4P78413 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
IRX4P78413 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.73■□□□□ 0.11
IRX4P78413 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
IRX4P78413 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IRX4P78413 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.73■□□□□ 0.11
IRX4P78413 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.73■□□□□ 0.11
IRX4P78413 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.73■□□□□ 0.11
IRX4P78413 AP001889.1-201ENST00000525414 633 ntBASIC15.73■□□□□ 0.11
IRX4P78413 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.73■□□□□ 0.11
IRX4P78413 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.73■□□□□ 0.11
IRX4P78413 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.73■□□□□ 0.11
IRX4P78413 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.73■□□□□ 0.11
IRX4P78413 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.73■□□□□ 0.11
IRX4P78413 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
IRX4P78413 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.73■□□□□ 0.11
IRX4P78413 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.73■□□□□ 0.11
IRX4P78413 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.73■□□□□ 0.11
IRX4P78413 AL139099.5-201ENST00000635274 300 ntBASIC15.73■□□□□ 0.11
IRX4P78413 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IRX4P78413 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
IRX4P78413 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.73■□□□□ 0.11
IRX4P78413 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IRX4P78413 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
IRX4P78413 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
IRX4P78413 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IRX4P78413 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.73■□□□□ 0.11
IRX4P78413 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IRX4P78413 AC015656.1-201ENST00000624209 3578 ntBASIC15.73■□□□□ 0.11
IRX4P78413 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
IRX4P78413 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
IRX4P78413 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
IRX4P78413 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IRX4P78413 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.73■□□□□ 0.11
IRX4P78413 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.73■□□□□ 0.11
IRX4P78413 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
IRX4P78413 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms