Protein–RNA interactions for Protein: P60673

PFN3, Profilin-3, humanhuman

Predictions only

Length 137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFN3P60673 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFN3P60673 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PFN3P60673 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFN3P60673 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.84□□□□□ -0.03
PFN3P60673 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PFN3P60673 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFN3P60673 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.84□□□□□ -0.03
PFN3P60673 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.84□□□□□ -0.03
PFN3P60673 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFN3P60673 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.84□□□□□ -0.03
PFN3P60673 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PFN3P60673 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFN3P60673 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFN3P60673 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PFN3P60673 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.84□□□□□ -0.03
PFN3P60673 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.84□□□□□ -0.03
PFN3P60673 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.84□□□□□ -0.03
PFN3P60673 CALR4P-201ENST00000431943 946 ntBASIC14.84□□□□□ -0.03
PFN3P60673 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.84□□□□□ -0.03
PFN3P60673 AKR7A2P1-201ENST00000460134 915 ntBASIC14.84□□□□□ -0.03
PFN3P60673 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PFN3P60673 AL606495.2-201ENST00000605867 535 ntBASIC14.84□□□□□ -0.03
PFN3P60673 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.84□□□□□ -0.03
PFN3P60673 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.84□□□□□ -0.03
PFN3P60673 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFN3P60673 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFN3P60673 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFN3P60673 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFN3P60673 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFN3P60673 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.84□□□□□ -0.03
PFN3P60673 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFN3P60673 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.84□□□□□ -0.03
PFN3P60673 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFN3P60673 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFN3P60673 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PFN3P60673 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PFN3P60673 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PFN3P60673 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PFN3P60673 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PFN3P60673 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PFN3P60673 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.03
PFN3P60673 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PFN3P60673 AC138028.6-201ENST00000616106 1482 ntBASIC14.83□□□□□ -0.03
PFN3P60673 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.83□□□□□ -0.03
PFN3P60673 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PFN3P60673 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFN3P60673 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PFN3P60673 INE2-201ENST00000630399 1874 ntBASIC14.83□□□□□ -0.04
PFN3P60673 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFN3P60673 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFN3P60673 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.83□□□□□ -0.04
PFN3P60673 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PFN3P60673 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.83□□□□□ -0.04
PFN3P60673 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PFN3P60673 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PFN3P60673 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.83□□□□□ -0.04
PFN3P60673 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PFN3P60673 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PFN3P60673 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.83□□□□□ -0.04
PFN3P60673 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.83□□□□□ -0.04
PFN3P60673 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.83□□□□□ -0.04
PFN3P60673 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFN3P60673 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.83□□□□□ -0.04
PFN3P60673 BX284668.4-201ENST00000453917 508 ntBASIC14.83□□□□□ -0.04
PFN3P60673 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PFN3P60673 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.83□□□□□ -0.04
PFN3P60673 SCARNA20.5-201ENST00000516991 142 ntBASIC14.83□□□□□ -0.04
PFN3P60673 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.83□□□□□ -0.04
PFN3P60673 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.83□□□□□ -0.04
PFN3P60673 MIR4683-201ENST00000579659 81 ntBASIC14.83□□□□□ -0.04
PFN3P60673 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.83□□□□□ -0.04
PFN3P60673 AL358472.3-201ENST00000608147 415 ntBASIC14.83□□□□□ -0.04
PFN3P60673 AC007663.3-201ENST00000609632 465 ntBASIC14.83□□□□□ -0.04
PFN3P60673 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PFN3P60673 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFN3P60673 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
PFN3P60673 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFN3P60673 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFN3P60673 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFN3P60673 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PFN3P60673 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.83□□□□□ -0.04
PFN3P60673 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFN3P60673 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFN3P60673 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFN3P60673 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PFN3P60673 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PFN3P60673 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PFN3P60673 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PFN3P60673 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
PFN3P60673 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PFN3P60673 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
PFN3P60673 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PFN3P60673 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PFN3P60673 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.82□□□□□ -0.04
PFN3P60673 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
PFN3P60673 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.82□□□□□ -0.04
PFN3P60673 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PFN3P60673 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.82□□□□□ -0.04
PFN3P60673 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PFN3P60673 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms