Protein–RNA interactions for Protein: P59665

DEFA1, Neutrophil defensin 1, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA1P59665 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC13.2□□□□□ -0.3
DEFA1P59665 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
DEFA1P59665 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.2□□□□□ -0.3
DEFA1P59665 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
DEFA1P59665 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 REXO1L4P-201ENST00000605109 1937 ntBASIC13.2□□□□□ -0.3
DEFA1P59665 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.2□□□□□ -0.3
DEFA1P59665 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
DEFA1P59665 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.2□□□□□ -0.3
DEFA1P59665 KRT18P38-201ENST00000449496 1282 ntBASIC13.2□□□□□ -0.3
DEFA1P59665 YBX1P2-201ENST00000489612 999 ntBASIC13.2□□□□□ -0.3
DEFA1P59665 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.2□□□□□ -0.3
DEFA1P59665 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.2□□□□□ -0.3
DEFA1P59665 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
DEFA1P59665 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
DEFA1P59665 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.2□□□□□ -0.3
DEFA1P59665 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
DEFA1P59665 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
DEFA1P59665 DLX4-206ENST00000611342 1662 ntBASIC13.2□□□□□ -0.3
DEFA1P59665 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
DEFA1P59665 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
DEFA1P59665 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
DEFA1P59665 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA1P59665 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC13.2□□□□□ -0.3
DEFA1P59665 AC006504.4-201ENST00000592118 1568 ntBASIC13.2□□□□□ -0.3
DEFA1P59665 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC13.2□□□□□ -0.3
DEFA1P59665 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
DEFA1P59665 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.19□□□□□ -0.3
DEFA1P59665 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.19□□□□□ -0.3
DEFA1P59665 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
DEFA1P59665 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.19□□□□□ -0.3
DEFA1P59665 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.19□□□□□ -0.3
DEFA1P59665 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.19□□□□□ -0.3
DEFA1P59665 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.19□□□□□ -0.3
DEFA1P59665 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.19□□□□□ -0.3
DEFA1P59665 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.19□□□□□ -0.3
DEFA1P59665 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.19□□□□□ -0.3
DEFA1P59665 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.19□□□□□ -0.3
DEFA1P59665 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.19□□□□□ -0.3
DEFA1P59665 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.19□□□□□ -0.3
DEFA1P59665 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
DEFA1P59665 AC004706.3-202ENST00000621574 984 ntBASIC13.19□□□□□ -0.3
DEFA1P59665 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.19□□□□□ -0.3
DEFA1P59665 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
DEFA1P59665 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.19□□□□□ -0.3
DEFA1P59665 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC13.19□□□□□ -0.3
DEFA1P59665 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.19□□□□□ -0.3
DEFA1P59665 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.19□□□□□ -0.3
DEFA1P59665 POM121L14P-201ENST00000406100 1558 ntBASIC13.19□□□□□ -0.3
DEFA1P59665 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
DEFA1P59665 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms