Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RHBDL3P58872 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RHBDL3P58872 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.52■□□□□ 0.39
RHBDL3P58872 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RHBDL3P58872 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RHBDL3P58872 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.51■□□□□ 0.39
RHBDL3P58872 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RHBDL3P58872 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
RHBDL3P58872 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.51■□□□□ 0.39
RHBDL3P58872 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHBDL3P58872 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.51■□□□□ 0.39
RHBDL3P58872 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHBDL3P58872 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RHBDL3P58872 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHBDL3P58872 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RHBDL3P58872 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RHBDL3P58872 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RHBDL3P58872 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.51■□□□□ 0.39
RHBDL3P58872 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
RHBDL3P58872 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.51■□□□□ 0.39
RHBDL3P58872 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.51■□□□□ 0.39
RHBDL3P58872 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.51■□□□□ 0.39
RHBDL3P58872 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHBDL3P58872 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.51■□□□□ 0.39
RHBDL3P58872 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.51■□□□□ 0.39
RHBDL3P58872 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
RHBDL3P58872 AC003686.1-201ENST00000550956 1034 ntBASIC17.51■□□□□ 0.39
RHBDL3P58872 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.51■□□□□ 0.39
RHBDL3P58872 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
RHBDL3P58872 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.51■□□□□ 0.39
RHBDL3P58872 AC012044.1-201ENST00000603431 297 ntBASIC17.51■□□□□ 0.39
RHBDL3P58872 AC018629.1-201ENST00000623381 1736 ntBASIC17.51■□□□□ 0.39
RHBDL3P58872 AC092299.1-201ENST00000632679 757 ntBASIC17.51■□□□□ 0.39
RHBDL3P58872 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.51■□□□□ 0.39
RHBDL3P58872 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHBDL3P58872 AC092384.3-202ENST00000564646 2873 ntBASIC17.51■□□□□ 0.39
RHBDL3P58872 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RHBDL3P58872 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHBDL3P58872 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.51■□□□□ 0.39
RHBDL3P58872 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHBDL3P58872 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHBDL3P58872 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RHBDL3P58872 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHBDL3P58872 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.51■□□□□ 0.39
RHBDL3P58872 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHBDL3P58872 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.51■□□□□ 0.39
RHBDL3P58872 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RHBDL3P58872 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHBDL3P58872 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RHBDL3P58872 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHBDL3P58872 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RHBDL3P58872 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RHBDL3P58872 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.5■□□□□ 0.39
RHBDL3P58872 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RHBDL3P58872 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHBDL3P58872 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHBDL3P58872 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.5■□□□□ 0.39
RHBDL3P58872 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RHBDL3P58872 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHBDL3P58872 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RHBDL3P58872 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.5■□□□□ 0.39
RHBDL3P58872 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.5■□□□□ 0.39
RHBDL3P58872 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.5■□□□□ 0.39
RHBDL3P58872 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.5■□□□□ 0.39
RHBDL3P58872 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.5■□□□□ 0.39
RHBDL3P58872 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.5■□□□□ 0.39
RHBDL3P58872 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.5■□□□□ 0.39
RHBDL3P58872 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.5■□□□□ 0.39
RHBDL3P58872 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RHBDL3P58872 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHBDL3P58872 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.5■□□□□ 0.39
RHBDL3P58872 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RHBDL3P58872 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHBDL3P58872 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.5■□□□□ 0.39
RHBDL3P58872 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RHBDL3P58872 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.5■□□□□ 0.39
RHBDL3P58872 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.5■□□□□ 0.39
RHBDL3P58872 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
RHBDL3P58872 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHBDL3P58872 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RHBDL3P58872 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RHBDL3P58872 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.49■□□□□ 0.39
RHBDL3P58872 AC018442.1-201ENST00000421439 2061 ntBASIC17.49■□□□□ 0.39
RHBDL3P58872 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RHBDL3P58872 AC009093.10-201ENST00000641956 1442 ntBASIC17.49■□□□□ 0.39
RHBDL3P58872 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.49■□□□□ 0.39
RHBDL3P58872 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.49■□□□□ 0.39
RHBDL3P58872 MIR33B-201ENST00000385104 96 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms