Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RIPPLY3P57055 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RIPPLY3P57055 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RIPPLY3P57055 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 AC084752.1-201ENST00000509766 622 ntBASIC12.55□□□□□ -0.4
RIPPLY3P57055 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RIPPLY3P57055 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 AC055811.3-201ENST00000584952 686 ntBASIC12.55□□□□□ -0.4
RIPPLY3P57055 PSME2-217ENST00000615264 874 ntTSL 5 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RIPPLY3P57055 AC011462.4-201ENST00000616866 449 ntBASIC12.55□□□□□ -0.4
RIPPLY3P57055 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RIPPLY3P57055 PSME2-218ENST00000630027 185 ntTSL 3 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RIPPLY3P57055 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RIPPLY3P57055 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RIPPLY3P57055 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RIPPLY3P57055 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RIPPLY3P57055 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RIPPLY3P57055 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RIPPLY3P57055 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.55□□□□□ -0.4
RIPPLY3P57055 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RIPPLY3P57055 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 REXO1L11P-201ENST00000620964 1927 ntBASIC12.54□□□□□ -0.4
RIPPLY3P57055 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 SNX18-202ENST00000343017 3140 ntBASIC12.54□□□□□ -0.4
RIPPLY3P57055 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 AC092171.3-201ENST00000610122 2651 ntBASIC12.54□□□□□ -0.4
RIPPLY3P57055 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 RN7SKP214-201ENST00000364208 315 ntBASIC12.54□□□□□ -0.4
RIPPLY3P57055 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 RBPMSLP-201ENST00000433427 502 ntBASIC12.54□□□□□ -0.4
RIPPLY3P57055 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 HIST2H2BB-201ENST00000449108 381 ntBASIC12.54□□□□□ -0.4
RIPPLY3P57055 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 RNMTL1P1-201ENST00000454103 560 ntBASIC12.54□□□□□ -0.4
RIPPLY3P57055 CHCHD2P9-201ENST00000461726 456 ntBASIC12.54□□□□□ -0.4
RIPPLY3P57055 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 AC018846.1-201ENST00000568231 183 ntBASIC12.54□□□□□ -0.4
RIPPLY3P57055 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.54□□□□□ -0.4
RIPPLY3P57055 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 AC073911.3-201ENST00000624401 631 ntBASIC12.54□□□□□ -0.4
RIPPLY3P57055 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RIPPLY3P57055 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RIPPLY3P57055 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms