Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN12P56749 AC005237.2-201ENST00000434368 219 ntBASIC13.14□□□□□ -0.31
CLDN12P56749 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN12P56749 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.14□□□□□ -0.31
CLDN12P56749 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN12P56749 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDN12P56749 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.14□□□□□ -0.31
CLDN12P56749 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN12P56749 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN12P56749 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN12P56749 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.14□□□□□ -0.31
CLDN12P56749 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLDN12P56749 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDN12P56749 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN12P56749 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDN12P56749 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLDN12P56749 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN12P56749 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDN12P56749 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDN12P56749 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN12P56749 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN12P56749 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLDN12P56749 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN12P56749 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN12P56749 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CLDN12P56749 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN12P56749 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN12P56749 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
CLDN12P56749 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN12P56749 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 AL121723.1-201ENST00000445194 1519 ntBASIC13.13□□□□□ -0.31
CLDN12P56749 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN12P56749 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN12P56749 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CLDN12P56749 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CLDN12P56749 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CLDN12P56749 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 FAM58DP-201ENST00000428076 619 ntBASIC13.13□□□□□ -0.31
CLDN12P56749 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN12P56749 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN12P56749 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN12P56749 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 AC099521.3-201ENST00000624251 2938 ntBASIC13.13□□□□□ -0.31
CLDN12P56749 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CLDN12P56749 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CLDN12P56749 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.13□□□□□ -0.31
CLDN12P56749 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CLDN12P56749 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CLDN12P56749 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN12P56749 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 Z97205.2-201ENST00000564697 1639 ntBASIC13.13□□□□□ -0.31
CLDN12P56749 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN12P56749 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDN12P56749 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 AC018665.1-201ENST00000622927 1362 ntBASIC13.12□□□□□ -0.31
CLDN12P56749 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.12□□□□□ -0.31
CLDN12P56749 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CLDN12P56749 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CLDN12P56749 KRT18P32-201ENST00000424695 1287 ntBASIC13.12□□□□□ -0.31
CLDN12P56749 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.12□□□□□ -0.31
CLDN12P56749 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDN12P56749 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.12□□□□□ -0.31
CLDN12P56749 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.12□□□□□ -0.31
CLDN12P56749 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDN12P56749 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.12□□□□□ -0.31
CLDN12P56749 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDN12P56749 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDN12P56749 SAMD11P1-201ENST00000571429 661 ntBASIC13.12□□□□□ -0.31
CLDN12P56749 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.12□□□□□ -0.31
CLDN12P56749 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CLDN12P56749 LINC01115-203ENST00000606068 577 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms