Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.14□□□□□ -0.31
FOXG1P55316 AP000593.2-201ENST00000542775 1433 ntBASIC13.14□□□□□ -0.31
FOXG1P55316 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.14□□□□□ -0.31
FOXG1P55316 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
FOXG1P55316 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 MTHFR-210ENST00000641407 2387 ntBASIC13.14□□□□□ -0.31
FOXG1P55316 AL023775.1-201ENST00000454907 1746 ntBASIC13.14□□□□□ -0.31
FOXG1P55316 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.14□□□□□ -0.31
FOXG1P55316 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 MIR1908-201ENST00000410394 80 ntBASIC13.14□□□□□ -0.31
FOXG1P55316 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
FOXG1P55316 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.14□□□□□ -0.31
FOXG1P55316 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.14□□□□□ -0.31
FOXG1P55316 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.14□□□□□ -0.31
FOXG1P55316 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.14□□□□□ -0.31
FOXG1P55316 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.14□□□□□ -0.31
FOXG1P55316 RN7SL560P-201ENST00000577943 264 ntBASIC13.14□□□□□ -0.31
FOXG1P55316 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.14□□□□□ -0.31
FOXG1P55316 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.14□□□□□ -0.31
FOXG1P55316 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.14□□□□□ -0.31
FOXG1P55316 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.14□□□□□ -0.31
FOXG1P55316 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
FOXG1P55316 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
FOXG1P55316 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 AC106881.1-201ENST00000605849 3329 ntBASIC13.14□□□□□ -0.31
FOXG1P55316 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.14□□□□□ -0.31
FOXG1P55316 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXG1P55316 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.13□□□□□ -0.31
FOXG1P55316 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.13□□□□□ -0.31
FOXG1P55316 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.13□□□□□ -0.31
FOXG1P55316 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.13□□□□□ -0.31
FOXG1P55316 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
FOXG1P55316 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
FOXG1P55316 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.13□□□□□ -0.31
FOXG1P55316 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
FOXG1P55316 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.13□□□□□ -0.31
FOXG1P55316 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
FOXG1P55316 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.13□□□□□ -0.31
FOXG1P55316 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
FOXG1P55316 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 MIR326-201ENST00000362220 95 ntBASIC13.13□□□□□ -0.31
FOXG1P55316 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
FOXG1P55316 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.13□□□□□ -0.31
FOXG1P55316 CHMP1AP1-201ENST00000445563 662 ntBASIC13.13□□□□□ -0.31
FOXG1P55316 HIST2H2BB-201ENST00000449108 381 ntBASIC13.13□□□□□ -0.31
FOXG1P55316 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.13□□□□□ -0.31
FOXG1P55316 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.13□□□□□ -0.31
FOXG1P55316 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.13□□□□□ -0.31
FOXG1P55316 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.13□□□□□ -0.31
FOXG1P55316 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.13□□□□□ -0.31
FOXG1P55316 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.13□□□□□ -0.31
FOXG1P55316 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.13□□□□□ -0.31
FOXG1P55316 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.13□□□□□ -0.31
FOXG1P55316 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
FOXG1P55316 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
FOXG1P55316 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
FOXG1P55316 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms