Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC008723.1-201ENST00000506922 207 ntBASIC17.16■□□□□ 0.34
HMGCS2P54868 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGCS2P54868 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.16■□□□□ 0.34
HMGCS2P54868 NPM1P43-201ENST00000558669 786 ntBASIC17.16■□□□□ 0.34
HMGCS2P54868 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HMGCS2P54868 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS2P54868 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGCS2P54868 RN7SL736P-201ENST00000613111 269 ntBASIC17.16■□□□□ 0.34
HMGCS2P54868 AC133540.1-201ENST00000620845 1019 ntBASIC17.16■□□□□ 0.34
HMGCS2P54868 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS2P54868 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.16■□□□□ 0.34
HMGCS2P54868 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS2P54868 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
HMGCS2P54868 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS2P54868 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS2P54868 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HMGCS2P54868 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS2P54868 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGCS2P54868 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS2P54868 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS2P54868 FRMPD2B-201ENST00000431305 1347 ntBASIC17.16■□□□□ 0.34
HMGCS2P54868 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS2P54868 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS2P54868 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.16■□□□□ 0.34
HMGCS2P54868 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS2P54868 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS2P54868 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS2P54868 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HMGCS2P54868 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS2P54868 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.15■□□□□ 0.34
HMGCS2P54868 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HMGCS2P54868 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
HMGCS2P54868 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS2P54868 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.15■□□□□ 0.34
HMGCS2P54868 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS2P54868 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS2P54868 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS2P54868 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS2P54868 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.15■□□□□ 0.34
HMGCS2P54868 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS2P54868 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
HMGCS2P54868 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS2P54868 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS2P54868 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS2P54868 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.15■□□□□ 0.34
HMGCS2P54868 AC026320.2-201ENST00000434379 478 ntBASIC17.15■□□□□ 0.34
HMGCS2P54868 AC078991.1-201ENST00000437297 610 ntBASIC17.15■□□□□ 0.34
HMGCS2P54868 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.15■□□□□ 0.34
HMGCS2P54868 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.15■□□□□ 0.34
HMGCS2P54868 AC103810.10-201ENST00000606504 343 ntBASIC17.15■□□□□ 0.34
HMGCS2P54868 AC092171.5-201ENST00000608012 942 ntBASIC17.15■□□□□ 0.34
HMGCS2P54868 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
HMGCS2P54868 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS2P54868 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS2P54868 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS2P54868 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.15■□□□□ 0.34
HMGCS2P54868 AC126365.1-201ENST00000578585 1514 ntBASIC17.15■□□□□ 0.34
HMGCS2P54868 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HMGCS2P54868 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HMGCS2P54868 AC015909.3-201ENST00000572855 1794 ntBASIC17.15■□□□□ 0.34
HMGCS2P54868 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HMGCS2P54868 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HMGCS2P54868 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS2P54868 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.15■□□□□ 0.34
HMGCS2P54868 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HMGCS2P54868 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS2P54868 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS2P54868 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
HMGCS2P54868 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS2P54868 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS2P54868 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS2P54868 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HMGCS2P54868 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS2P54868 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS2P54868 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.14■□□□□ 0.33
HMGCS2P54868 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.14■□□□□ 0.33
HMGCS2P54868 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS2P54868 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.14■□□□□ 0.33
HMGCS2P54868 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS2P54868 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.14■□□□□ 0.33
HMGCS2P54868 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HMGCS2P54868 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.14■□□□□ 0.33
HMGCS2P54868 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.14■□□□□ 0.33
HMGCS2P54868 RBM8B-201ENST00000555532 525 ntBASIC17.14■□□□□ 0.33
HMGCS2P54868 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC17.14■□□□□ 0.33
HMGCS2P54868 MIR3677-201ENST00000578964 60 ntBASIC17.14■□□□□ 0.33
HMGCS2P54868 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.14■□□□□ 0.33
HMGCS2P54868 AC087045.2-201ENST00000606279 1003 ntBASIC17.14■□□□□ 0.33
HMGCS2P54868 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.14■□□□□ 0.33
HMGCS2P54868 MIR6769A-201ENST00000617340 73 ntBASIC17.14■□□□□ 0.33
HMGCS2P54868 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS2P54868 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS2P54868 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS2P54868 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS2P54868 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS2P54868 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.14■□□□□ 0.33
HMGCS2P54868 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.14■□□□□ 0.33
HMGCS2P54868 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HMGCS2P54868 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.14■□□□□ 0.33
HMGCS2P54868 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms