Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCR9P51686 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCR9P51686 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCR9P51686 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CCR9P51686 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCR9P51686 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.29□□□□□ -0.28
CCR9P51686 RPSAP43-201ENST00000402237 625 ntBASIC13.29□□□□□ -0.28
CCR9P51686 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCR9P51686 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.29□□□□□ -0.28
CCR9P51686 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.29□□□□□ -0.28
CCR9P51686 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.29□□□□□ -0.28
CCR9P51686 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.29□□□□□ -0.28
CCR9P51686 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.29□□□□□ -0.28
CCR9P51686 TIMM17BP1-201ENST00000545713 516 ntBASIC13.29□□□□□ -0.28
CCR9P51686 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CCR9P51686 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
CCR9P51686 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.29□□□□□ -0.28
CCR9P51686 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
CCR9P51686 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.29□□□□□ -0.28
CCR9P51686 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCR9P51686 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCR9P51686 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCR9P51686 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CCR9P51686 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCR9P51686 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCR9P51686 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCR9P51686 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCR9P51686 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.29□□□□□ -0.28
CCR9P51686 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
CCR9P51686 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CCR9P51686 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCR9P51686 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCR9P51686 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.29□□□□□ -0.28
CCR9P51686 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
CCR9P51686 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCR9P51686 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.29□□□□□ -0.28
CCR9P51686 AL354702.1-201ENST00000442006 1960 ntBASIC13.29□□□□□ -0.28
CCR9P51686 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
CCR9P51686 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.28□□□□□ -0.28
CCR9P51686 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.28□□□□□ -0.28
CCR9P51686 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.28□□□□□ -0.28
CCR9P51686 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
CCR9P51686 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.28□□□□□ -0.28
CCR9P51686 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
CCR9P51686 DGCR9-201ENST00000609630 2415 ntBASIC13.28□□□□□ -0.28
CCR9P51686 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.28□□□□□ -0.28
CCR9P51686 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
CCR9P51686 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CCR9P51686 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.28□□□□□ -0.28
CCR9P51686 AC211486.1-202ENST00000416371 468 ntBASIC13.28□□□□□ -0.28
CCR9P51686 UPF3AP3-201ENST00000420996 769 ntBASIC13.28□□□□□ -0.28
CCR9P51686 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.28□□□□□ -0.28
CCR9P51686 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.28□□□□□ -0.28
CCR9P51686 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.28□□□□□ -0.28
CCR9P51686 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.28□□□□□ -0.28
CCR9P51686 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.28□□□□□ -0.28
CCR9P51686 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.28□□□□□ -0.28
CCR9P51686 AC211476.1-201ENST00000503899 468 ntBASIC13.28□□□□□ -0.28
CCR9P51686 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.28□□□□□ -0.28
CCR9P51686 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.28□□□□□ -0.28
CCR9P51686 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.28□□□□□ -0.28
CCR9P51686 AC092337.1-201ENST00000568699 1129 ntBASIC13.28□□□□□ -0.28
CCR9P51686 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.28□□□□□ -0.28
CCR9P51686 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.28□□□□□ -0.28
CCR9P51686 AC073592.8-201ENST00000624126 511 ntBASIC13.28□□□□□ -0.28
CCR9P51686 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.28□□□□□ -0.28
CCR9P51686 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CCR9P51686 AC087499.5-201ENST00000452760 1342 ntBASIC13.28□□□□□ -0.28
CCR9P51686 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.28□□□□□ -0.28
CCR9P51686 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.28□□□□□ -0.28
CCR9P51686 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.28□□□□□ -0.28
CCR9P51686 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCR9P51686 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCR9P51686 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CCR9P51686 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
CCR9P51686 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCR9P51686 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCR9P51686 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CCR9P51686 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms