Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.17□□□□□ -0.3
GDNFP39905 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
GDNFP39905 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
GDNFP39905 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
GDNFP39905 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
GDNFP39905 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
GDNFP39905 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.17□□□□□ -0.3
GDNFP39905 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
GDNFP39905 AC136604.1-201ENST00000418535 575 ntBASIC13.17□□□□□ -0.3
GDNFP39905 TSEN15P1-201ENST00000423257 515 ntBASIC13.17□□□□□ -0.3
GDNFP39905 AL353705.2-201ENST00000428243 662 ntBASIC13.17□□□□□ -0.3
GDNFP39905 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.17□□□□□ -0.3
GDNFP39905 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.17□□□□□ -0.3
GDNFP39905 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.17□□□□□ -0.3
GDNFP39905 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
GDNFP39905 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.17□□□□□ -0.3
GDNFP39905 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.17□□□□□ -0.3
GDNFP39905 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.17□□□□□ -0.3
GDNFP39905 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
GDNFP39905 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
GDNFP39905 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
GDNFP39905 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.17□□□□□ -0.3
GDNFP39905 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
GDNFP39905 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.17□□□□□ -0.3
GDNFP39905 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
GDNFP39905 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.16□□□□□ -0.3
GDNFP39905 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.16□□□□□ -0.3
GDNFP39905 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.16□□□□□ -0.3
GDNFP39905 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
GDNFP39905 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
GDNFP39905 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.16□□□□□ -0.3
GDNFP39905 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
GDNFP39905 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.16□□□□□ -0.3
GDNFP39905 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.16□□□□□ -0.3
GDNFP39905 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 HLA-J-203ENST00000494367 1087 ntBASIC13.16□□□□□ -0.3
GDNFP39905 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.16□□□□□ -0.3
GDNFP39905 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
GDNFP39905 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.16□□□□□ -0.3
GDNFP39905 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 AL133215.2-201ENST00000609242 977 ntBASIC13.16□□□□□ -0.3
GDNFP39905 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.16□□□□□ -0.3
GDNFP39905 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.16□□□□□ -0.3
GDNFP39905 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.16□□□□□ -0.3
GDNFP39905 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 AC012508.2-201ENST00000567613 1472 ntBASIC13.16□□□□□ -0.3
GDNFP39905 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
GDNFP39905 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
GDNFP39905 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.16□□□□□ -0.3
GDNFP39905 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GDNFP39905 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.16□□□□□ -0.3
GDNFP39905 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
GDNFP39905 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms