Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC19.85■□□□□ 0.77
USP6P35125 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP6P35125 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC19.85■□□□□ 0.77
USP6P35125 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP6P35125 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP6P35125 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP6P35125 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP6P35125 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC19.85■□□□□ 0.77
USP6P35125 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP6P35125 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.85■□□□□ 0.77
USP6P35125 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP6P35125 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP6P35125 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP6P35125 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.85■□□□□ 0.77
USP6P35125 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
USP6P35125 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP6P35125 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
USP6P35125 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP6P35125 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC19.85■□□□□ 0.77
USP6P35125 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC19.85■□□□□ 0.77
USP6P35125 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP6P35125 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP6P35125 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP6P35125 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC19.85■□□□□ 0.77
USP6P35125 AC092580.1-201ENST00000433998 658 ntBASIC19.85■□□□□ 0.77
USP6P35125 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC19.85■□□□□ 0.77
USP6P35125 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
USP6P35125 AC073911.3-201ENST00000624401 631 ntBASIC19.85■□□□□ 0.77
USP6P35125 AC009145.4-201ENST00000625119 1294 ntBASIC19.85■□□□□ 0.77
USP6P35125 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC19.84■□□□□ 0.77
USP6P35125 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
USP6P35125 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP6P35125 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP6P35125 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP6P35125 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC19.84■□□□□ 0.77
USP6P35125 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP6P35125 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP6P35125 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
USP6P35125 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP6P35125 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP6P35125 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC19.84■□□□□ 0.77
USP6P35125 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP6P35125 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
USP6P35125 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
USP6P35125 HLA-DQB1-202ENST00000399079 1501 ntBASIC19.84■□□□□ 0.77
USP6P35125 AC091951.1-201ENST00000512854 2465 ntBASIC19.84■□□□□ 0.77
USP6P35125 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
USP6P35125 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP6P35125 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP6P35125 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC19.84■□□□□ 0.77
USP6P35125 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC19.84■□□□□ 0.77
USP6P35125 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC19.84■□□□□ 0.77
USP6P35125 POLD4-208ENST00000532830 904 ntTSL 3 BASIC19.84■□□□□ 0.77
USP6P35125 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP6P35125 AC005041.3-201ENST00000606287 649 ntBASIC19.84■□□□□ 0.77
USP6P35125 HLA-C-210ENST00000640219 976 ntBASIC19.84■□□□□ 0.77
USP6P35125 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC19.84■□□□□ 0.77
USP6P35125 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
USP6P35125 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP6P35125 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC19.83■□□□□ 0.77
USP6P35125 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP6P35125 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP6P35125 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP6P35125 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.83■□□□□ 0.77
USP6P35125 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.83■□□□□ 0.77
USP6P35125 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC19.83■□□□□ 0.77
USP6P35125 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP6P35125 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP6P35125 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP6P35125 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC19.83■□□□□ 0.76
USP6P35125 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
USP6P35125 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
USP6P35125 ZEB1-AS1-208ENST00000607166 2503 ntBASIC19.83■□□□□ 0.76
USP6P35125 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC19.83■□□□□ 0.76
USP6P35125 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP6P35125 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
USP6P35125 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC19.83■□□□□ 0.76
USP6P35125 RN7SL530P-201ENST00000485097 298 ntBASIC19.83■□□□□ 0.76
USP6P35125 CD164-210ENST00000512821 964 ntTSL 2 BASIC19.83■□□□□ 0.76
USP6P35125 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC19.83■□□□□ 0.76
USP6P35125 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.83■□□□□ 0.76
USP6P35125 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP6P35125 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.83■□□□□ 0.76
USP6P35125 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC19.83■□□□□ 0.76
USP6P35125 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.83■□□□□ 0.76
USP6P35125 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC19.83■□□□□ 0.76
USP6P35125 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
USP6P35125 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP6P35125 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC19.82■□□□□ 0.76
USP6P35125 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC19.82■□□□□ 0.76
USP6P35125 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC19.82■□□□□ 0.76
USP6P35125 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP6P35125 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
USP6P35125 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6P35125 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6P35125 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.82■□□□□ 0.76
USP6P35125 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6P35125 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6P35125 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6P35125 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms