Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC005730.2-201ENST00000564549 1184 ntBASIC15.36■□□□□ 0.05
SLC6A4P31645 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.36■□□□□ 0.05
SLC6A4P31645 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.36■□□□□ 0.05
SLC6A4P31645 AL136301.1-201ENST00000615830 422 ntBASIC15.36■□□□□ 0.05
SLC6A4P31645 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.36■□□□□ 0.05
SLC6A4P31645 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A4P31645 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.36■□□□□ 0.05
SLC6A4P31645 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.36■□□□□ 0.05
SLC6A4P31645 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.36■□□□□ 0.05
SLC6A4P31645 AC103702.1-201ENST00000548801 2630 ntBASIC15.36■□□□□ 0.05
SLC6A4P31645 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A4P31645 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A4P31645 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A4P31645 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A4P31645 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A4P31645 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A4P31645 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SLC6A4P31645 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A4P31645 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.36■□□□□ 0.05
SLC6A4P31645 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
SLC6A4P31645 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.36■□□□□ 0.05
SLC6A4P31645 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A4P31645 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A4P31645 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A4P31645 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SLC6A4P31645 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A4P31645 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A4P31645 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SLC6A4P31645 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A4P31645 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A4P31645 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A4P31645 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A4P31645 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A4P31645 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.35■□□□□ 0.05
SLC6A4P31645 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A4P31645 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SLC6A4P31645 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.35■□□□□ 0.05
SLC6A4P31645 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.35■□□□□ 0.05
SLC6A4P31645 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
SLC6A4P31645 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A4P31645 GCOM2-201ENST00000509133 1104 ntBASIC15.35■□□□□ 0.05
SLC6A4P31645 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC6A4P31645 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC6A4P31645 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC6A4P31645 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.35■□□□□ 0.05
SLC6A4P31645 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.35■□□□□ 0.05
SLC6A4P31645 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC6A4P31645 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A4P31645 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A4P31645 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A4P31645 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
SLC6A4P31645 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A4P31645 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC6A4P31645 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A4P31645 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A4P31645 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SLC6A4P31645 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A4P31645 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
SLC6A4P31645 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A4P31645 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
SLC6A4P31645 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SLC6A4P31645 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
SLC6A4P31645 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SLC6A4P31645 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC6A4P31645 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC6A4P31645 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.34■□□□□ 0.05
SLC6A4P31645 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 AL354877.1-201ENST00000424412 413 ntBASIC15.34■□□□□ 0.05
SLC6A4P31645 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC6A4P31645 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC6A4P31645 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC6A4P31645 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
SLC6A4P31645 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 AL008638.5-201ENST00000623814 1298 ntBASIC15.34■□□□□ 0.05
SLC6A4P31645 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC6A4P31645 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC6A4P31645 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SLC6A4P31645 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
SLC6A4P31645 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC6A4P31645 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
SLC6A4P31645 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SLC6A4P31645 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A4P31645 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms