Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
SHC1P29353 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 REXO1L4P-201ENST00000605109 1937 ntBASIC13.84□□□□□ -0.19
SHC1P29353 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.84□□□□□ -0.19
SHC1P29353 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
SHC1P29353 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.83□□□□□ -0.19
SHC1P29353 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SHC1P29353 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SHC1P29353 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
SHC1P29353 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SHC1P29353 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SHC1P29353 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.83□□□□□ -0.19
SHC1P29353 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.83□□□□□ -0.2
SHC1P29353 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
SHC1P29353 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.83□□□□□ -0.2
SHC1P29353 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.83□□□□□ -0.2
SHC1P29353 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
SHC1P29353 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.83□□□□□ -0.2
SHC1P29353 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.83□□□□□ -0.2
SHC1P29353 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.83□□□□□ -0.2
SHC1P29353 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.83□□□□□ -0.2
SHC1P29353 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.83□□□□□ -0.2
SHC1P29353 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SHC1P29353 AC104457.1-201ENST00000401024 814 ntBASIC13.83□□□□□ -0.2
SHC1P29353 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
SHC1P29353 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.83□□□□□ -0.2
SHC1P29353 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 AL162726.2-201ENST00000438986 1017 ntBASIC13.83□□□□□ -0.2
SHC1P29353 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.83□□□□□ -0.2
SHC1P29353 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.83□□□□□ -0.2
SHC1P29353 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SHC1P29353 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.83□□□□□ -0.2
SHC1P29353 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.83□□□□□ -0.2
SHC1P29353 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.83□□□□□ -0.2
SHC1P29353 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.83□□□□□ -0.2
SHC1P29353 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.83□□□□□ -0.2
SHC1P29353 AL358472.5-202ENST00000641448 1267 ntBASIC13.83□□□□□ -0.2
SHC1P29353 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.83□□□□□ -0.2
SHC1P29353 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.83□□□□□ -0.2
SHC1P29353 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
SHC1P29353 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
SHC1P29353 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SHC1P29353 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.83□□□□□ -0.2
SHC1P29353 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
SHC1P29353 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.83□□□□□ -0.2
SHC1P29353 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHC1P29353 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 AP000845.1-201ENST00000581677 2131 ntBASIC13.82□□□□□ -0.2
SHC1P29353 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SHC1P29353 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SHC1P29353 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
SHC1P29353 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.82□□□□□ -0.2
SHC1P29353 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.82□□□□□ -0.2
SHC1P29353 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SHC1P29353 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.82□□□□□ -0.2
SHC1P29353 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.82□□□□□ -0.2
SHC1P29353 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.82□□□□□ -0.2
SHC1P29353 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 AL512384.1-201ENST00000406683 331 ntBASIC13.82□□□□□ -0.2
SHC1P29353 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.82□□□□□ -0.2
SHC1P29353 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.82□□□□□ -0.2
SHC1P29353 AC004066.1-201ENST00000502488 802 ntBASIC13.82□□□□□ -0.2
SHC1P29353 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SHC1P29353 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SHC1P29353 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHC1P29353 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms