Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.91□□□□□ -0.34
TNFSF4P23510 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 DMBT1P1-203ENST00000636837 4628 ntBASIC12.91□□□□□ -0.34
TNFSF4P23510 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.91□□□□□ -0.34
TNFSF4P23510 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.91□□□□□ -0.34
TNFSF4P23510 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 TPM3P8-201ENST00000330554 643 ntBASIC12.91□□□□□ -0.34
TNFSF4P23510 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.91□□□□□ -0.34
TNFSF4P23510 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.91□□□□□ -0.34
TNFSF4P23510 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TNFSF4P23510 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.91□□□□□ -0.34
TNFSF4P23510 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.91□□□□□ -0.34
TNFSF4P23510 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.91□□□□□ -0.34
TNFSF4P23510 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.91□□□□□ -0.34
TNFSF4P23510 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.91□□□□□ -0.34
TNFSF4P23510 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.91□□□□□ -0.34
TNFSF4P23510 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
TNFSF4P23510 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.91□□□□□ -0.34
TNFSF4P23510 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TNFSF4P23510 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TNFSF4P23510 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TNFSF4P23510 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.91□□□□□ -0.34
TNFSF4P23510 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.91□□□□□ -0.34
TNFSF4P23510 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TNFSF4P23510 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.91□□□□□ -0.34
TNFSF4P23510 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 AC023157.3-201ENST00000619086 2088 ntBASIC12.9□□□□□ -0.34
TNFSF4P23510 REXO1L5P-201ENST00000622260 2098 ntBASIC12.9□□□□□ -0.34
TNFSF4P23510 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.9□□□□□ -0.34
TNFSF4P23510 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TNFSF4P23510 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
TNFSF4P23510 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TNFSF4P23510 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
TNFSF4P23510 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TNFSF4P23510 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.9□□□□□ -0.34
TNFSF4P23510 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TNFSF4P23510 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.9□□□□□ -0.34
TNFSF4P23510 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TNFSF4P23510 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.9□□□□□ -0.34
TNFSF4P23510 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.9□□□□□ -0.34
TNFSF4P23510 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TNFSF4P23510 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.9□□□□□ -0.34
TNFSF4P23510 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
TNFSF4P23510 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.9□□□□□ -0.34
TNFSF4P23510 AC007551.1-201ENST00000457394 519 ntBASIC12.9□□□□□ -0.34
TNFSF4P23510 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TNFSF4P23510 AC106760.1-201ENST00000508690 800 ntBASIC12.9□□□□□ -0.34
TNFSF4P23510 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TNFSF4P23510 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TNFSF4P23510 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TNFSF4P23510 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.9□□□□□ -0.34
TNFSF4P23510 RN7SL48P-201ENST00000579283 293 ntBASIC12.9□□□□□ -0.34
TNFSF4P23510 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms