Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFX1P22670 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.39■□□□□ 0.21
RFX1P22670 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX1P22670 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RFX1P22670 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.39■□□□□ 0.21
RFX1P22670 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RFX1P22670 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RFX1P22670 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX1P22670 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFX1P22670 AC005229.1-201ENST00000392885 409 ntBASIC16.39■□□□□ 0.21
RFX1P22670 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.39■□□□□ 0.21
RFX1P22670 RPL7P3-201ENST00000441388 714 ntBASIC16.39■□□□□ 0.21
RFX1P22670 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFX1P22670 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.39■□□□□ 0.21
RFX1P22670 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFX1P22670 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.39■□□□□ 0.21
RFX1P22670 AC091271.1-201ENST00000611877 1162 ntBASIC16.39■□□□□ 0.21
RFX1P22670 AL603764.1-201ENST00000636452 321 ntBASIC16.39■□□□□ 0.21
RFX1P22670 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX1P22670 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFX1P22670 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RFX1P22670 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX1P22670 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX1P22670 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFX1P22670 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RFX1P22670 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.39■□□□□ 0.21
RFX1P22670 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX1P22670 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFX1P22670 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX1P22670 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.39■□□□□ 0.21
RFX1P22670 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX1P22670 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
RFX1P22670 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX1P22670 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFX1P22670 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.38■□□□□ 0.21
RFX1P22670 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX1P22670 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RFX1P22670 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RFX1P22670 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.38■□□□□ 0.21
RFX1P22670 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFX1P22670 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RFX1P22670 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX1P22670 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.38■□□□□ 0.21
RFX1P22670 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX1P22670 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RFX1P22670 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX1P22670 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX1P22670 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX1P22670 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX1P22670 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
RFX1P22670 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.38■□□□□ 0.21
RFX1P22670 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFX1P22670 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.38■□□□□ 0.21
RFX1P22670 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.38■□□□□ 0.21
RFX1P22670 AC068587.3-201ENST00000526613 355 ntBASIC16.38■□□□□ 0.21
RFX1P22670 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX1P22670 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.38■□□□□ 0.21
RFX1P22670 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.38■□□□□ 0.21
RFX1P22670 AC120045.2-201ENST00000567334 178 ntBASIC16.38■□□□□ 0.21
RFX1P22670 MIR3615-201ENST00000581999 87 ntBASIC16.38■□□□□ 0.21
RFX1P22670 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
RFX1P22670 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RFX1P22670 BX539320.1-201ENST00000623759 877 ntBASIC16.38■□□□□ 0.21
RFX1P22670 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.38■□□□□ 0.21
RFX1P22670 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.38■□□□□ 0.21
RFX1P22670 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX1P22670 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX1P22670 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.38■□□□□ 0.21
RFX1P22670 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX1P22670 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RFX1P22670 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.38■□□□□ 0.21
RFX1P22670 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
RFX1P22670 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFX1P22670 AL157414.3-201ENST00000624276 1954 ntBASIC16.38■□□□□ 0.21
RFX1P22670 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.38■□□□□ 0.21
RFX1P22670 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RFX1P22670 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
RFX1P22670 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.38■□□□□ 0.21
RFX1P22670 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.38■□□□□ 0.21
RFX1P22670 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.38■□□□□ 0.21
RFX1P22670 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX1P22670 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFX1P22670 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RFX1P22670 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.37■□□□□ 0.21
RFX1P22670 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RFX1P22670 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RFX1P22670 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX1P22670 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms