Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 BLK-205ENST00000529894 2017 ntTSL 5 BASIC11.89□□□□□ -0.51
NF1P21359 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NF1P21359 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC11.89□□□□□ -0.51
NF1P21359 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC11.89□□□□□ -0.51
NF1P21359 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC11.89□□□□□ -0.51
NF1P21359 AC112220.4-201ENST00000604982 1263 ntBASIC11.89□□□□□ -0.51
NF1P21359 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC11.89□□□□□ -0.51
NF1P21359 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC11.89□□□□□ -0.51
NF1P21359 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NF1P21359 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NF1P21359 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC11.89□□□□□ -0.51
NF1P21359 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
NF1P21359 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NF1P21359 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
NF1P21359 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
NF1P21359 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC11.89□□□□□ -0.51
NF1P21359 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NF1P21359 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NF1P21359 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NF1P21359 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.89□□□□□ -0.51
NF1P21359 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NF1P21359 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NF1P21359 RNVU1-8-201ENST00000364272 125 ntBASIC11.89□□□□□ -0.51
NF1P21359 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
NF1P21359 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NF1P21359 ALG1L3P-201ENST00000503331 765 ntBASIC11.89□□□□□ -0.51
NF1P21359 RN7SL357P-201ENST00000581065 298 ntBASIC11.89□□□□□ -0.51
NF1P21359 MIR3188-201ENST00000583494 85 ntBASIC11.89□□□□□ -0.51
NF1P21359 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC11.89□□□□□ -0.51
NF1P21359 AL357143.1-203ENST00000639750 881 ntBASIC11.89□□□□□ -0.51
NF1P21359 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NF1P21359 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NF1P21359 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NF1P21359 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
NF1P21359 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NF1P21359 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
NF1P21359 API5-208ENST00000531273 1868 ntTSL 2 BASIC11.89□□□□□ -0.51
NF1P21359 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NF1P21359 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC11.89□□□□□ -0.51
NF1P21359 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC11.88□□□□□ -0.51
NF1P21359 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
NF1P21359 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC11.88□□□□□ -0.51
NF1P21359 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 AC108734.2-201ENST00000420887 1069 ntBASIC11.88□□□□□ -0.51
NF1P21359 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC11.88□□□□□ -0.51
NF1P21359 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.88□□□□□ -0.51
NF1P21359 TPST2P1-201ENST00000564073 1102 ntBASIC11.88□□□□□ -0.51
NF1P21359 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC11.88□□□□□ -0.51
NF1P21359 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC11.88□□□□□ -0.51
NF1P21359 HELLS-212ENST00000630929 400 ntTSL 5 BASIC11.88□□□□□ -0.51
NF1P21359 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC11.88□□□□□ -0.51
NF1P21359 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.88□□□□□ -0.51
NF1P21359 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC11.88□□□□□ -0.51
NF1P21359 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
NF1P21359 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC11.88□□□□□ -0.51
NF1P21359 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC11.88□□□□□ -0.51
NF1P21359 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC11.88□□□□□ -0.51
NF1P21359 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.88□□□□□ -0.51
NF1P21359 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
NF1P21359 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 AL627095.1-201ENST00000414775 321 ntBASIC11.88□□□□□ -0.51
NF1P21359 DNM1P48-201ENST00000419538 439 ntBASIC11.88□□□□□ -0.51
NF1P21359 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 RN7SL23P-201ENST00000484055 275 ntBASIC11.88□□□□□ -0.51
NF1P21359 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC11.88□□□□□ -0.51
NF1P21359 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC11.88□□□□□ -0.51
NF1P21359 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC11.88□□□□□ -0.51
NF1P21359 RN7SL440P-201ENST00000577855 343 ntBASIC11.88□□□□□ -0.51
NF1P21359 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.88□□□□□ -0.51
NF1P21359 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC11.88□□□□□ -0.51
NF1P21359 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 RPL4P6-201ENST00000438116 1304 ntBASIC11.88□□□□□ -0.51
NF1P21359 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC11.88□□□□□ -0.51
NF1P21359 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC11.88□□□□□ -0.51
NF1P21359 PCDHA1-201ENST00000378133 2726 ntBASIC11.88□□□□□ -0.51
NF1P21359 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC11.88□□□□□ -0.51
NF1P21359 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NF1P21359 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
NF1P21359 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
NF1P21359 AC007292.2-201ENST00000593524 1812 ntBASIC11.87□□□□□ -0.51
NF1P21359 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
NF1P21359 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms