Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
ATF1P18846 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ATF1P18846 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.25□□□□□ -0.29
ATF1P18846 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ATF1P18846 AC109322.1-201ENST00000524499 1264 ntBASIC13.25□□□□□ -0.29
ATF1P18846 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.25□□□□□ -0.29
ATF1P18846 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ATF1P18846 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
ATF1P18846 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.25□□□□□ -0.29
ATF1P18846 AL596442.2-201ENST00000610240 980 ntBASIC13.25□□□□□ -0.29
ATF1P18846 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.25□□□□□ -0.29
ATF1P18846 AC073592.8-201ENST00000624126 511 ntBASIC13.25□□□□□ -0.29
ATF1P18846 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.25□□□□□ -0.29
ATF1P18846 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ATF1P18846 AC130686.1-201ENST00000622936 2466 ntBASIC13.25□□□□□ -0.29
ATF1P18846 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.25□□□□□ -0.29
ATF1P18846 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ATF1P18846 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 AC099521.3-201ENST00000624251 2938 ntBASIC13.25□□□□□ -0.29
ATF1P18846 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.25□□□□□ -0.29
ATF1P18846 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
ATF1P18846 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.25□□□□□ -0.29
ATF1P18846 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ATF1P18846 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ATF1P18846 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
ATF1P18846 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ATF1P18846 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.24□□□□□ -0.29
ATF1P18846 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ATF1P18846 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ATF1P18846 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ATF1P18846 TUBB3P1-201ENST00000405796 1332 ntBASIC13.24□□□□□ -0.29
ATF1P18846 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ATF1P18846 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.24□□□□□ -0.29
ATF1P18846 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 CNN2P2-201ENST00000443536 909 ntBASIC13.24□□□□□ -0.29
ATF1P18846 CNN2P3-201ENST00000450201 906 ntBASIC13.24□□□□□ -0.29
ATF1P18846 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.24□□□□□ -0.29
ATF1P18846 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.24□□□□□ -0.29
ATF1P18846 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.24□□□□□ -0.29
ATF1P18846 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.24□□□□□ -0.29
ATF1P18846 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.24□□□□□ -0.29
ATF1P18846 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.24□□□□□ -0.29
ATF1P18846 AL136317.3-201ENST00000618497 906 ntBASIC13.24□□□□□ -0.29
ATF1P18846 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.24□□□□□ -0.29
ATF1P18846 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.24□□□□□ -0.29
ATF1P18846 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.24□□□□□ -0.29
ATF1P18846 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ATF1P18846 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 COL6A4P2-202ENST00000504443 2753 ntBASIC13.24□□□□□ -0.29
ATF1P18846 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
ATF1P18846 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATF1P18846 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.23□□□□□ -0.29
ATF1P18846 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
ATF1P18846 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
ATF1P18846 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms