Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.79■□□□□ 0.12
PDGFRAP16234 ARSEP1-201ENST00000420443 635 ntBASIC15.79■□□□□ 0.12
PDGFRAP16234 BCRP2-202ENST00000447763 634 ntBASIC15.79■□□□□ 0.12
PDGFRAP16234 CROCCP4-201ENST00000457096 498 ntBASIC15.79■□□□□ 0.12
PDGFRAP16234 ACA64.2-201ENST00000459014 129 ntBASIC15.79■□□□□ 0.12
PDGFRAP16234 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.79■□□□□ 0.12
PDGFRAP16234 BCRP6-201ENST00000510112 632 ntBASIC15.79■□□□□ 0.12
PDGFRAP16234 BCRP7-201ENST00000511549 544 ntBASIC15.79■□□□□ 0.12
PDGFRAP16234 IGHV3-71-201ENST00000523324 359 ntBASIC15.79■□□□□ 0.12
PDGFRAP16234 AC106886.1-201ENST00000568660 600 ntBASIC15.79■□□□□ 0.12
PDGFRAP16234 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.79■□□□□ 0.12
PDGFRAP16234 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
PDGFRAP16234 AC145423.3-201ENST00000615987 467 ntBASIC15.79■□□□□ 0.12
PDGFRAP16234 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFRAP16234 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFRAP16234 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFRAP16234 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PDGFRAP16234 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PDGFRAP16234 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFRAP16234 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PDGFRAP16234 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
PDGFRAP16234 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PDGFRAP16234 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.79■□□□□ 0.12
PDGFRAP16234 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PDGFRAP16234 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PDGFRAP16234 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFRAP16234 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFRAP16234 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFRAP16234 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFRAP16234 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFRAP16234 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFRAP16234 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.78■□□□□ 0.12
PDGFRAP16234 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.78■□□□□ 0.12
PDGFRAP16234 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 AC007292.2-201ENST00000593524 1812 ntBASIC15.78■□□□□ 0.12
PDGFRAP16234 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFRAP16234 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.78■□□□□ 0.12
PDGFRAP16234 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PDGFRAP16234 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.78■□□□□ 0.12
PDGFRAP16234 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.78■□□□□ 0.12
PDGFRAP16234 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.78■□□□□ 0.12
PDGFRAP16234 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.78■□□□□ 0.12
PDGFRAP16234 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.78■□□□□ 0.12
PDGFRAP16234 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.78■□□□□ 0.12
PDGFRAP16234 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.78■□□□□ 0.12
PDGFRAP16234 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.78■□□□□ 0.12
PDGFRAP16234 AP001889.1-201ENST00000525414 633 ntBASIC15.78■□□□□ 0.12
PDGFRAP16234 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.78■□□□□ 0.12
PDGFRAP16234 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.78■□□□□ 0.12
PDGFRAP16234 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.78■□□□□ 0.12
PDGFRAP16234 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PDGFRAP16234 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.78■□□□□ 0.12
PDGFRAP16234 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.78■□□□□ 0.12
PDGFRAP16234 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.78■□□□□ 0.12
PDGFRAP16234 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.78■□□□□ 0.12
PDGFRAP16234 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 AL513477.1-201ENST00000602865 2407 ntBASIC15.78■□□□□ 0.12
PDGFRAP16234 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFRAP16234 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.78■□□□□ 0.12
PDGFRAP16234 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PDGFRAP16234 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFRAP16234 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFRAP16234 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFRAP16234 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFRAP16234 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFRAP16234 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFRAP16234 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PDGFRAP16234 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFRAP16234 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.77■□□□□ 0.12
PDGFRAP16234 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFRAP16234 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
PDGFRAP16234 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFRAP16234 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFRAP16234 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.77■□□□□ 0.12
PDGFRAP16234 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFRAP16234 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFRAP16234 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PDGFRAP16234 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFRAP16234 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PDGFRAP16234 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFRAP16234 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFRAP16234 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms