Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL4P13236 AC239868.1-201ENST00000369385 493 ntBASIC14.06□□□□□ -0.16
CCL4P13236 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CCL4P13236 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL4P13236 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL4P13236 AC078875.1-201ENST00000431907 724 ntBASIC14.06□□□□□ -0.16
CCL4P13236 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.06□□□□□ -0.16
CCL4P13236 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.06□□□□□ -0.16
CCL4P13236 GCOM2-201ENST00000509133 1104 ntBASIC14.06□□□□□ -0.16
CCL4P13236 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.06□□□□□ -0.16
CCL4P13236 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.06□□□□□ -0.16
CCL4P13236 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.06□□□□□ -0.16
CCL4P13236 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CCL4P13236 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.06□□□□□ -0.16
CCL4P13236 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.06□□□□□ -0.16
CCL4P13236 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL4P13236 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL4P13236 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL4P13236 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.06□□□□□ -0.16
CCL4P13236 AC092978.1-202ENST00000637590 1327 ntBASIC14.06□□□□□ -0.16
CCL4P13236 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.06□□□□□ -0.16
CCL4P13236 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL4P13236 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL4P13236 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.06□□□□□ -0.16
CCL4P13236 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CCL4P13236 TBC1D3J-201ENST00000620719 1426 ntBASIC14.06□□□□□ -0.16
CCL4P13236 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL4P13236 SSR4P1-203ENST00000599569 2260 ntBASIC14.06□□□□□ -0.16
CCL4P13236 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CCL4P13236 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.06□□□□□ -0.16
CCL4P13236 KRT8P21-201ENST00000430398 1491 ntBASIC14.06□□□□□ -0.16
CCL4P13236 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL4P13236 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.05□□□□□ -0.16
CCL4P13236 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 MROH4P-201ENST00000431302 1578 ntBASIC14.05□□□□□ -0.16
CCL4P13236 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.05□□□□□ -0.16
CCL4P13236 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL4P13236 AC144522.1-201ENST00000625111 1658 ntBASIC14.05□□□□□ -0.16
CCL4P13236 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL4P13236 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CCL4P13236 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL4P13236 IGF1-203ENST00000392904 761 ntTSL 5 BASIC14.05□□□□□ -0.16
CCL4P13236 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL4P13236 AC253536.4-201ENST00000440539 267 ntBASIC14.05□□□□□ -0.16
CCL4P13236 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.05□□□□□ -0.16
CCL4P13236 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.05□□□□□ -0.16
CCL4P13236 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 AC019193.1-201ENST00000506678 823 ntBASIC14.05□□□□□ -0.16
CCL4P13236 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.05□□□□□ -0.16
CCL4P13236 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.05□□□□□ -0.16
CCL4P13236 POU5F1P2-201ENST00000521750 823 ntBASIC14.05□□□□□ -0.16
CCL4P13236 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CCL4P13236 AC018635.2-201ENST00000608625 364 ntBASIC14.05□□□□□ -0.16
CCL4P13236 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.05□□□□□ -0.16
CCL4P13236 AC007718.1-201ENST00000621078 280 ntBASIC14.05□□□□□ -0.16
CCL4P13236 AC007292.2-201ENST00000593524 1812 ntBASIC14.05□□□□□ -0.16
CCL4P13236 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CCL4P13236 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
CCL4P13236 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL4P13236 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.05□□□□□ -0.16
CCL4P13236 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.05□□□□□ -0.16
CCL4P13236 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.05□□□□□ -0.16
CCL4P13236 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL4P13236 AC126365.1-201ENST00000578585 1514 ntBASIC14.05□□□□□ -0.16
CCL4P13236 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL4P13236 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL4P13236 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CCL4P13236 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 ZBED1P1-201ENST00000502364 1930 ntBASIC14.04□□□□□ -0.16
CCL4P13236 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL4P13236 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL4P13236 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms