Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 AP005117.1-202ENST00000581724 1908 ntBASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.72■□□□□ 0.75
CSB-PGBD3P0DP91 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 AC025271.4-201ENST00000621477 1726 ntBASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 CYP4F23P-201ENST00000593402 1579 ntBASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 NAGK-204ENST00000443872 878 ntTSL 3 BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 AP000358.1-201ENST00000456260 156 ntBASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 AC133540.1-201ENST00000620845 1019 ntBASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSB-PGBD3P0DP91 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.74
CSB-PGBD3P0DP91 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 AL035414.1-201ENST00000451327 857 ntBASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 ALG3P1-201ENST00000508806 1114 ntBASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 RBM8B-201ENST00000555532 525 ntBASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 AC005632.3-201ENST00000605544 308 ntBASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 PCDHB19P-201ENST00000570871 2371 ntBASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
CSB-PGBD3P0DP91 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CSB-PGBD3P0DP91 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC19.69■□□□□ 0.74
CSB-PGBD3P0DP91 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms