Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 AC005562.1-201ENST00000583030 3219 ntBASIC11.29□□□□□ -0.6
SMIM17P0DL12 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 RN7SL510P-201ENST00000581311 263 ntBASIC11.29□□□□□ -0.6
SMIM17P0DL12 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 AC084364.1-201ENST00000551967 1556 ntBASIC11.28□□□□□ -0.6
SMIM17P0DL12 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 AC104109.2-201ENST00000602919 1418 ntBASIC11.28□□□□□ -0.6
SMIM17P0DL12 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 AC007967.2-201ENST00000432613 625 ntBASIC11.28□□□□□ -0.6
SMIM17P0DL12 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 SPDYE11-202ENST00000450699 704 ntBASIC11.28□□□□□ -0.6
SMIM17P0DL12 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 RNA5SP416-201ENST00000516838 111 ntBASIC11.28□□□□□ -0.6
SMIM17P0DL12 PENK-208ENST00000523051 772 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 HNRNPUP1-201ENST00000554987 333 ntBASIC11.28□□□□□ -0.6
SMIM17P0DL12 SPDYE9P-201ENST00000570642 692 ntBASIC11.28□□□□□ -0.6
SMIM17P0DL12 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM17P0DL12 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC11.28□□□□□ -0.6
SMIM17P0DL12 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms