Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.06■□□□□ 0
MMP2P08253 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 BOLA2P3-201ENST00000404566 256 ntBASIC15.06■□□□□ 0
MMP2P08253 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
MMP2P08253 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.06■□□□□ 0
MMP2P08253 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
MMP2P08253 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.06■□□□□ 0
MMP2P08253 AC234783.1-201ENST00000441761 496 ntBASIC15.06■□□□□ 0
MMP2P08253 KLF2P4-201ENST00000451959 1225 ntBASIC15.06■□□□□ 0
MMP2P08253 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.06■□□□□ 0
MMP2P08253 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.06■□□□□ 0
MMP2P08253 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
MMP2P08253 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
MMP2P08253 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.06■□□□□ 0
MMP2P08253 MIR4683-201ENST00000579659 81 ntBASIC15.06■□□□□ 0
MMP2P08253 RN7SL713P-201ENST00000582127 302 ntBASIC15.06■□□□□ 0
MMP2P08253 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 BX088702.1-201ENST00000610784 235 ntBASIC15.06■□□□□ 0
MMP2P08253 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.06■□□□□ 0
MMP2P08253 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.06■□□□□ 0
MMP2P08253 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
MMP2P08253 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.06■□□□□ 0
MMP2P08253 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.06■□□□□ 0
MMP2P08253 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.06■□□□□ 0
MMP2P08253 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.06■□□□□ 0
MMP2P08253 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP2P08253 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MMP2P08253 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.05■□□□□ 0
MMP2P08253 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
MMP2P08253 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.05■□□□□ 0
MMP2P08253 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MMP2P08253 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
MMP2P08253 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
MMP2P08253 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MMP2P08253 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.05■□□□□ 0
MMP2P08253 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
MMP2P08253 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.05■□□□□ -0
MMP2P08253 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
MMP2P08253 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MMP2P08253 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MMP2P08253 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.05■□□□□ -0
MMP2P08253 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.05■□□□□ -0
MMP2P08253 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
MMP2P08253 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.05■□□□□ -0
MMP2P08253 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.05■□□□□ -0
MMP2P08253 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.05■□□□□ -0
MMP2P08253 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.05■□□□□ -0
MMP2P08253 AP001002.3-201ENST00000623482 206 ntBASIC15.05■□□□□ -0
MMP2P08253 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.05■□□□□ -0
MMP2P08253 MRPL37P1-201ENST00000592451 1337 ntBASIC15.05■□□□□ -0
MMP2P08253 AL136172.1-201ENST00000598590 1394 ntBASIC15.05■□□□□ -0
MMP2P08253 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.05■□□□□ -0
MMP2P08253 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
MMP2P08253 AL354989.2-201ENST00000435838 1540 ntBASIC15.05■□□□□ -0
MMP2P08253 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.05■□□□□ -0
MMP2P08253 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.05■□□□□ -0
MMP2P08253 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.05■□□□□ -0
MMP2P08253 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MMP2P08253 AGGF1P1-201ENST00000509500 2073 ntBASIC15.05■□□□□ -0
MMP2P08253 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.05■□□□□ -0
MMP2P08253 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.05■□□□□ -0
MMP2P08253 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
MMP2P08253 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MMP2P08253 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MMP2P08253 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.05■□□□□ -0
MMP2P08253 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
MMP2P08253 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.05■□□□□ -0
MMP2P08253 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
MMP2P08253 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MMP2P08253 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MMP2P08253 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
MMP2P08253 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
MMP2P08253 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
MMP2P08253 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MMP2P08253 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.04■□□□□ -0
MMP2P08253 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MMP2P08253 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.04■□□□□ -0
MMP2P08253 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
MMP2P08253 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
MMP2P08253 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
MMP2P08253 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms