Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
RETP07949 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RETP07949 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RETP07949 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RETP07949 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RETP07949 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RETP07949 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RETP07949 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RETP07949 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
RETP07949 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.15■□□□□ 0.02
RETP07949 AC026316.1-201ENST00000398900 414 ntBASIC15.15■□□□□ 0.02
RETP07949 HIST2H2BB-201ENST00000449108 381 ntBASIC15.15■□□□□ 0.02
RETP07949 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.15■□□□□ 0.02
RETP07949 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
RETP07949 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.15■□□□□ 0.02
RETP07949 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.15■□□□□ 0.02
RETP07949 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.15■□□□□ 0.02
RETP07949 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RETP07949 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.15■□□□□ 0.02
RETP07949 NPM1P43-201ENST00000558669 786 ntBASIC15.15■□□□□ 0.02
RETP07949 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RETP07949 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RETP07949 OR10B1P-201ENST00000601666 907 ntBASIC15.15■□□□□ 0.02
RETP07949 AC103691.2-201ENST00000618824 433 ntBASIC15.15■□□□□ 0.02
RETP07949 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RETP07949 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RETP07949 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RETP07949 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RETP07949 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RETP07949 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RETP07949 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RETP07949 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RETP07949 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.15■□□□□ 0.02
RETP07949 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.15■□□□□ 0.02
RETP07949 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RETP07949 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RETP07949 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RETP07949 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.15■□□□□ 0.02
RETP07949 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RETP07949 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RETP07949 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RETP07949 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.15■□□□□ 0.02
RETP07949 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.15■□□□□ 0.02
RETP07949 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RETP07949 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
RETP07949 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RETP07949 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RETP07949 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RETP07949 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RETP07949 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.14■□□□□ 0.01
RETP07949 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RETP07949 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.14■□□□□ 0.01
RETP07949 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.14■□□□□ 0.01
RETP07949 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.14■□□□□ 0.01
RETP07949 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.14■□□□□ 0.01
RETP07949 RN7SL8P-201ENST00000461771 266 ntBASIC15.14■□□□□ 0.01
RETP07949 AC100850.1-201ENST00000506768 649 ntBASIC15.14■□□□□ 0.01
RETP07949 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.14■□□□□ 0.01
RETP07949 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.14■□□□□ 0.01
RETP07949 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.14■□□□□ 0.01
RETP07949 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.14■□□□□ 0.01
RETP07949 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.14■□□□□ 0.01
RETP07949 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.14■□□□□ 0.01
RETP07949 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.14■□□□□ 0.01
RETP07949 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.14■□□□□ 0.01
RETP07949 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.14■□□□□ 0.01
RETP07949 BNIP3P13-201ENST00000599968 566 ntBASIC15.14■□□□□ 0.01
RETP07949 AC073413.1-201ENST00000603927 732 ntBASIC15.14■□□□□ 0.01
RETP07949 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.14■□□□□ 0.01
RETP07949 AC004923.1-202ENST00000642106 209 ntBASIC15.14■□□□□ 0.01
RETP07949 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
RETP07949 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
RETP07949 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.14■□□□□ 0.01
RETP07949 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.14■□□□□ 0.01
RETP07949 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.14■□□□□ 0.01
RETP07949 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RETP07949 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
RETP07949 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms