Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 AC020910.5-201ENST00000623668 1865 ntBASIC15.22■□□□□ 0.03
HLA-DQB2P05538 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
HLA-DQB2P05538 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 AC005912.2-201ENST00000619492 2400 ntBASIC15.21■□□□□ 0.03
HLA-DQB2P05538 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 AC005034.1-201ENST00000426657 489 ntBASIC15.21■□□□□ 0.03
HLA-DQB2P05538 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 AC007551.1-201ENST00000457394 519 ntBASIC15.21■□□□□ 0.03
HLA-DQB2P05538 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 AC078819.1-201ENST00000547454 765 ntBASIC15.21■□□□□ 0.03
HLA-DQB2P05538 AC012085.1-201ENST00000548270 765 ntBASIC15.21■□□□□ 0.03
HLA-DQB2P05538 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 AL035252.4-201ENST00000624174 288 ntBASIC15.21■□□□□ 0.03
HLA-DQB2P05538 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DQB2P05538 AP001267.2-201ENST00000532619 2086 ntBASIC15.21■□□□□ 0.03
HLA-DQB2P05538 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DQB2P05538 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DQB2P05538 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DQB2P05538 AC023908.3-201ENST00000564211 3047 ntBASIC15.21■□□□□ 0.02
HLA-DQB2P05538 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.21■□□□□ 0.02
HLA-DQB2P05538 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
HLA-DQB2P05538 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DQB2P05538 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DQB2P05538 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
HLA-DQB2P05538 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DQB2P05538 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DQB2P05538 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DQB2P05538 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQB2P05538 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQB2P05538 AC097359.2-201ENST00000604992 2389 ntBASIC15.2■□□□□ 0.02
HLA-DQB2P05538 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQB2P05538 AL354702.1-201ENST00000442006 1960 ntBASIC15.2■□□□□ 0.02
HLA-DQB2P05538 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQB2P05538 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DQB2P05538 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HLA-DQB2P05538 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DQB2P05538 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQB2P05538 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQB2P05538 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQB2P05538 KRT43P-201ENST00000434019 910 ntBASIC15.2■□□□□ 0.02
HLA-DQB2P05538 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
HLA-DQB2P05538 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DQB2P05538 FTLP10-202ENST00000505798 471 ntBASIC15.2■□□□□ 0.02
HLA-DQB2P05538 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQB2P05538 RNA5SP486-201ENST00000515961 83 ntBASIC15.2■□□□□ 0.02
HLA-DQB2P05538 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.2■□□□□ 0.02
HLA-DQB2P05538 AP003171.2-201ENST00000528208 925 ntBASIC15.2■□□□□ 0.02
HLA-DQB2P05538 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.2■□□□□ 0.02
HLA-DQB2P05538 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DQB2P05538 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.2■□□□□ 0.02
HLA-DQB2P05538 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.2■□□□□ 0.02
HLA-DQB2P05538 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DQB2P05538 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms