Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.66□□□□□ -0.38
CD74P04233 FAM90A12P-201ENST00000519497 2375 ntBASIC12.66□□□□□ -0.38
CD74P04233 FAM90A24P-201ENST00000520792 2369 ntBASIC12.66□□□□□ -0.38
CD74P04233 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CD74P04233 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.66□□□□□ -0.38
CD74P04233 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CD74P04233 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.66□□□□□ -0.38
CD74P04233 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.66□□□□□ -0.38
CD74P04233 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 AL137783.1-201ENST00000623494 1896 ntBASIC12.66□□□□□ -0.38
CD74P04233 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.66□□□□□ -0.38
CD74P04233 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CD74P04233 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CD74P04233 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CD74P04233 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.66□□□□□ -0.38
CD74P04233 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 AL592309.1-201ENST00000443127 649 ntBASIC12.66□□□□□ -0.38
CD74P04233 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.66□□□□□ -0.38
CD74P04233 ALG1L8P-201ENST00000533887 760 ntBASIC12.66□□□□□ -0.38
CD74P04233 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CD74P04233 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.66□□□□□ -0.38
CD74P04233 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.66□□□□□ -0.38
CD74P04233 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CD74P04233 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.66□□□□□ -0.38
CD74P04233 AC000095.1-201ENST00000603208 874 ntBASIC12.66□□□□□ -0.38
CD74P04233 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
CD74P04233 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.66□□□□□ -0.38
CD74P04233 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.66□□□□□ -0.38
CD74P04233 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CD74P04233 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CD74P04233 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 AL035456.1-201ENST00000456064 1369 ntBASIC12.66□□□□□ -0.38
CD74P04233 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
CD74P04233 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.66□□□□□ -0.38
CD74P04233 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CD74P04233 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.66□□□□□ -0.38
CD74P04233 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CD74P04233 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD74P04233 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.65□□□□□ -0.38
CD74P04233 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.65□□□□□ -0.38
CD74P04233 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CD74P04233 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CD74P04233 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.65□□□□□ -0.38
CD74P04233 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CD74P04233 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CD74P04233 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.65□□□□□ -0.38
CD74P04233 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.65□□□□□ -0.38
CD74P04233 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 HLA-K-203ENST00000430151 1046 ntBASIC12.65□□□□□ -0.38
CD74P04233 TIMM8BP1-201ENST00000452384 211 ntBASIC12.65□□□□□ -0.38
CD74P04233 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.65□□□□□ -0.38
CD74P04233 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
CD74P04233 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.65□□□□□ -0.38
CD74P04233 AC026150.2-201ENST00000564693 1156 ntBASIC12.65□□□□□ -0.38
CD74P04233 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.65□□□□□ -0.38
CD74P04233 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.65□□□□□ -0.38
CD74P04233 AC007967.4-201ENST00000614700 386 ntBASIC12.65□□□□□ -0.38
CD74P04233 LINC00628-201ENST00000628516 1289 ntBASIC12.65□□□□□ -0.38
CD74P04233 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.65□□□□□ -0.38
CD74P04233 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms