Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALDH1A1P00352 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC16.83■□□□□ 0.28
ALDH1A1P00352 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ALDH1A1P00352 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
ALDH1A1P00352 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.83■□□□□ 0.28
ALDH1A1P00352 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ALDH1A1P00352 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ALDH1A1P00352 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALDH1A1P00352 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALDH1A1P00352 AC099398.1-201ENST00000567919 2776 ntBASIC16.83■□□□□ 0.28
ALDH1A1P00352 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALDH1A1P00352 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALDH1A1P00352 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ALDH1A1P00352 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALDH1A1P00352 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ALDH1A1P00352 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALDH1A1P00352 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ALDH1A1P00352 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALDH1A1P00352 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALDH1A1P00352 AC004554.1-201ENST00000422830 1468 ntBASIC16.82■□□□□ 0.28
ALDH1A1P00352 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALDH1A1P00352 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALDH1A1P00352 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 SIGLEC22P-201ENST00000599104 714 ntBASIC16.82■□□□□ 0.28
ALDH1A1P00352 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALDH1A1P00352 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALDH1A1P00352 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALDH1A1P00352 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALDH1A1P00352 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.82■□□□□ 0.28
ALDH1A1P00352 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ALDH1A1P00352 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALDH1A1P00352 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALDH1A1P00352 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALDH1A1P00352 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALDH1A1P00352 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALDH1A1P00352 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALDH1A1P00352 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALDH1A1P00352 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALDH1A1P00352 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALDH1A1P00352 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALDH1A1P00352 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALDH1A1P00352 SURF4-203ENST00000371991 715 ntTSL 3 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALDH1A1P00352 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 MIR1301-201ENST00000408518 82 ntBASIC16.81■□□□□ 0.28
ALDH1A1P00352 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 PGAM1P12-201ENST00000505622 748 ntBASIC16.81■□□□□ 0.28
ALDH1A1P00352 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALDH1A1P00352 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ALDH1A1P00352 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ALDH1A1P00352 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALDH1A1P00352 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ALDH1A1P00352 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ALDH1A1P00352 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ALDH1A1P00352 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ALDH1A1P00352 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms